Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.32□□□□□ -0.28
Ebf1Q07802 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Gm15808-201ENSMUST00000119046 604 ntBASIC13.32□□□□□ -0.28
Ebf1Q07802 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Ebf1Q07802 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ebf1Q07802 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.32□□□□□ -0.28
Ebf1Q07802 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Ebf1Q07802 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.32□□□□□ -0.28
Ebf1Q07802 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.32□□□□□ -0.28
Ebf1Q07802 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ebf1Q07802 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.32□□□□□ -0.28
Ebf1Q07802 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.32□□□□□ -0.28
Ebf1Q07802 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.31□□□□□ -0.28
Ebf1Q07802 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf1Q07802 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf1Q07802 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf1Q07802 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ebf1Q07802 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ebf1Q07802 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf1Q07802 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf1Q07802 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ebf1Q07802 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.31□□□□□ -0.28
Ebf1Q07802 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf1Q07802 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf1Q07802 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.31□□□□□ -0.28
Ebf1Q07802 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ebf1Q07802 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf1Q07802 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.31□□□□□ -0.28
Ebf1Q07802 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ebf1Q07802 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf1Q07802 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.31□□□□□ -0.28
Ebf1Q07802 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.31□□□□□ -0.28
Ebf1Q07802 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf1Q07802 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.31□□□□□ -0.28
Ebf1Q07802 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf1Q07802 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ebf1Q07802 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.31□□□□□ -0.28
Ebf1Q07802 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ebf1Q07802 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf1Q07802 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf1Q07802 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf1Q07802 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf1Q07802 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ebf1Q07802 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf1Q07802 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf1Q07802 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.31□□□□□ -0.28
Ebf1Q07802 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf1Q07802 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Ebf1Q07802 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ebf1Q07802 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.31□□□□□ -0.28
Ebf1Q07802 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.31□□□□□ -0.28
Ebf1Q07802 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ebf1Q07802 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Rubie-203ENSMUST00000227803 2430 ntBASIC13.3□□□□□ -0.28
Ebf1Q07802 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Gm22323-201ENSMUST00000103832 109 ntBASIC13.3□□□□□ -0.28
Ebf1Q07802 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ebf1Q07802 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.3□□□□□ -0.28
Ebf1Q07802 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.3□□□□□ -0.28
Ebf1Q07802 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.3□□□□□ -0.28
Ebf1Q07802 Gm26461-201ENSMUST00000175064 290 ntBASIC13.3□□□□□ -0.28
Ebf1Q07802 Gm37259-201ENSMUST00000193903 849 ntBASIC13.3□□□□□ -0.28
Ebf1Q07802 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms