Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col17a1Q07563 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC19.68■□□□□ 0.74
Col17a1Q07563 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col17a1Q07563 Gm5700-201ENSMUST00000191483 989 ntBASIC19.68■□□□□ 0.74
Col17a1Q07563 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC19.68■□□□□ 0.74
Col17a1Q07563 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col17a1Q07563 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col17a1Q07563 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col17a1Q07563 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col17a1Q07563 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col17a1Q07563 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Col17a1Q07563 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col17a1Q07563 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col17a1Q07563 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col17a1Q07563 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col17a1Q07563 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col17a1Q07563 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Col17a1Q07563 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Col17a1Q07563 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col17a1Q07563 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col17a1Q07563 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col17a1Q07563 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Col17a1Q07563 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col17a1Q07563 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col17a1Q07563 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col17a1Q07563 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col17a1Q07563 Gm12856-201ENSMUST00000119471 1293 ntBASIC19.67■□□□□ 0.74
Col17a1Q07563 Gm14213-201ENSMUST00000119778 768 ntBASIC19.67■□□□□ 0.74
Col17a1Q07563 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col17a1Q07563 Gm4462-201ENSMUST00000166453 492 ntBASIC19.67■□□□□ 0.74
Col17a1Q07563 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC19.67■□□□□ 0.74
Col17a1Q07563 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col17a1Q07563 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col17a1Q07563 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col17a1Q07563 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col17a1Q07563 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.67■□□□□ 0.74
Col17a1Q07563 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col17a1Q07563 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col17a1Q07563 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Col17a1Q07563 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
Col17a1Q07563 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col17a1Q07563 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col17a1Q07563 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col17a1Q07563 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Col17a1Q07563 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col17a1Q07563 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col17a1Q07563 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col17a1Q07563 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col17a1Q07563 Gm24248-201ENSMUST00000157321 322 ntBASIC19.67■□□□□ 0.74
Col17a1Q07563 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC19.67■□□□□ 0.74
Col17a1Q07563 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col17a1Q07563 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC19.67■□□□□ 0.74
Col17a1Q07563 AC105408.1-201ENSMUST00000227771 802 ntBASIC19.67■□□□□ 0.74
Col17a1Q07563 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col17a1Q07563 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col17a1Q07563 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Col17a1Q07563 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col17a1Q07563 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col17a1Q07563 Gm43823-201ENSMUST00000197391 1808 ntBASIC19.66■□□□□ 0.74
Col17a1Q07563 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col17a1Q07563 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col17a1Q07563 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col17a1Q07563 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col17a1Q07563 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Col17a1Q07563 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col17a1Q07563 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC19.66■□□□□ 0.74
Col17a1Q07563 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col17a1Q07563 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col17a1Q07563 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col17a1Q07563 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col17a1Q07563 Gm22711-201ENSMUST00000116890 133 ntBASIC19.66■□□□□ 0.74
Col17a1Q07563 Gm13263-201ENSMUST00000121271 838 ntBASIC19.66■□□□□ 0.74
Col17a1Q07563 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Col17a1Q07563 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC19.66■□□□□ 0.74
Col17a1Q07563 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
Col17a1Q07563 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC19.66■□□□□ 0.74
Col17a1Q07563 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col17a1Q07563 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC19.66■□□□□ 0.74
Col17a1Q07563 Gm3726-201ENSMUST00000203110 785 ntBASIC19.66■□□□□ 0.74
Col17a1Q07563 Gm43969-201ENSMUST00000204833 535 ntBASIC19.66■□□□□ 0.74
Col17a1Q07563 AC166344.1-201ENSMUST00000223745 674 ntBASIC19.66■□□□□ 0.74
Col17a1Q07563 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col17a1Q07563 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col17a1Q07563 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col17a1Q07563 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Col17a1Q07563 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col17a1Q07563 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Col17a1Q07563 AC107763.1-201ENSMUST00000226082 1365 ntBASIC19.65■□□□□ 0.74
Col17a1Q07563 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col17a1Q07563 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col17a1Q07563 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col17a1Q07563 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC19.65■□□□□ 0.74
Col17a1Q07563 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col17a1Q07563 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col17a1Q07563 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col17a1Q07563 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC19.65■□□□□ 0.74
Col17a1Q07563 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col17a1Q07563 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col17a1Q07563 Gm22920-201ENSMUST00000102175 109 ntBASIC19.65■□□□□ 0.74
Col17a1Q07563 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms