Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox4Q06831 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox4Q06831 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.91□□□□□ -0.34
Sox4Q06831 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox4Q06831 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
Sox4Q06831 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox4Q06831 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Sox4Q06831 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox4Q06831 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox4Q06831 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox4Q06831 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox4Q06831 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox4Q06831 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox4Q06831 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox4Q06831 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox4Q06831 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox4Q06831 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox4Q06831 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.91□□□□□ -0.34
Sox4Q06831 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox4Q06831 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox4Q06831 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.91□□□□□ -0.34
Sox4Q06831 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox4Q06831 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Sox4Q06831 Gm13226-201ENSMUST00000117838 404 ntBASIC12.91□□□□□ -0.34
Sox4Q06831 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.91□□□□□ -0.34
Sox4Q06831 Mir1982-201ENSMUST00000157368 74 ntBASIC12.91□□□□□ -0.34
Sox4Q06831 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox4Q06831 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Sox4Q06831 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.91□□□□□ -0.34
Sox4Q06831 Gm27731-201ENSMUST00000185192 107 ntBASIC12.91□□□□□ -0.34
Sox4Q06831 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.91□□□□□ -0.34
Sox4Q06831 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.91□□□□□ -0.34
Sox4Q06831 Gm43818-201ENSMUST00000200605 466 ntBASIC12.91□□□□□ -0.34
Sox4Q06831 Gm18062-201ENSMUST00000208020 547 ntBASIC12.91□□□□□ -0.34
Sox4Q06831 Gm18055-201ENSMUST00000208254 547 ntBASIC12.91□□□□□ -0.34
Sox4Q06831 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox4Q06831 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox4Q06831 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox4Q06831 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Sox4Q06831 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Sox4Q06831 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox4Q06831 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox4Q06831 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox4Q06831 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Sox4Q06831 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Sox4Q06831 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Sox4Q06831 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Sox4Q06831 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.9□□□□□ -0.34
Sox4Q06831 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.9□□□□□ -0.34
Sox4Q06831 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.9□□□□□ -0.34
Sox4Q06831 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.9□□□□□ -0.34
Sox4Q06831 Mir7085-201ENSMUST00000184353 66 ntBASIC12.9□□□□□ -0.34
Sox4Q06831 Gm28693-202ENSMUST00000190758 331 ntBASIC12.9□□□□□ -0.34
Sox4Q06831 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.9□□□□□ -0.34
Sox4Q06831 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.9□□□□□ -0.34
Sox4Q06831 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.9□□□□□ -0.34
Sox4Q06831 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.9□□□□□ -0.34
Sox4Q06831 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Sox4Q06831 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox4Q06831 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Sox4Q06831 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Sox4Q06831 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.9□□□□□ -0.35
Sox4Q06831 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.9□□□□□ -0.35
Sox4Q06831 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.9□□□□□ -0.35
Sox4Q06831 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.89□□□□□ -0.35
Sox4Q06831 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.89□□□□□ -0.35
Sox4Q06831 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox4Q06831 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Sox4Q06831 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox4Q06831 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox4Q06831 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox4Q06831 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.89□□□□□ -0.35
Sox4Q06831 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms