Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a1Q05722 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a1Q05722 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a1Q05722 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a1Q05722 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a1Q05722 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a1Q05722 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a1Q05722 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a1Q05722 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Col9a1Q05722 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a1Q05722 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.98□□□□□ -0.33
Col9a1Q05722 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a1Q05722 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a1Q05722 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a1Q05722 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a1Q05722 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Col9a1Q05722 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a1Q05722 Gm13549-201ENSMUST00000118339 796 ntBASIC12.98□□□□□ -0.33
Col9a1Q05722 Gm7113-201ENSMUST00000120477 958 ntBASIC12.98□□□□□ -0.33
Col9a1Q05722 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a1Q05722 Gm22138-201ENSMUST00000158748 128 ntBASIC12.98□□□□□ -0.33
Col9a1Q05722 Gm3760-201ENSMUST00000167475 804 ntBASIC12.98□□□□□ -0.33
Col9a1Q05722 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a1Q05722 Gm28941-201ENSMUST00000185536 1017 ntBASIC12.98□□□□□ -0.33
Col9a1Q05722 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC12.98□□□□□ -0.33
Col9a1Q05722 AC126043.1-201ENSMUST00000221304 1141 ntBASIC12.98□□□□□ -0.33
Col9a1Q05722 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Col9a1Q05722 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a1Q05722 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a1Q05722 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Col9a1Q05722 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.98□□□□□ -0.33
Col9a1Q05722 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a1Q05722 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Col9a1Q05722 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a1Q05722 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a1Q05722 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Col9a1Q05722 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a1Q05722 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Col9a1Q05722 Gm37234-201ENSMUST00000193259 1441 ntBASIC12.97□□□□□ -0.33
Col9a1Q05722 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.97□□□□□ -0.33
Col9a1Q05722 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.97□□□□□ -0.33
Col9a1Q05722 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.97□□□□□ -0.33
Col9a1Q05722 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Col9a1Q05722 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Col9a1Q05722 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Col9a1Q05722 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Col9a1Q05722 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Col9a1Q05722 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Col9a1Q05722 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Gm14350-201ENSMUST00000116642 640 ntBASIC12.97□□□□□ -0.33
Col9a1Q05722 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.97□□□□□ -0.33
Col9a1Q05722 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.97□□□□□ -0.33
Col9a1Q05722 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.97□□□□□ -0.33
Col9a1Q05722 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Col9a1Q05722 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC12.97□□□□□ -0.33
Col9a1Q05722 Gm18348-201ENSMUST00000191227 820 ntBASIC12.97□□□□□ -0.33
Col9a1Q05722 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC12.97□□□□□ -0.33
Col9a1Q05722 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.97□□□□□ -0.33
Col9a1Q05722 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.97□□□□□ -0.33
Col9a1Q05722 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC12.97□□□□□ -0.33
Col9a1Q05722 Trav11n-201ENSMUST00000200113 343 ntBASIC12.97□□□□□ -0.33
Col9a1Q05722 9930120I10Rik-201ENSMUST00000203027 865 ntBASIC12.97□□□□□ -0.33
Col9a1Q05722 Gm17812-201ENSMUST00000204935 318 ntBASIC12.97□□□□□ -0.33
Col9a1Q05722 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.97□□□□□ -0.33
Col9a1Q05722 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.97□□□□□ -0.33
Col9a1Q05722 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Gm8712-201ENSMUST00000221090 701 ntBASIC12.97□□□□□ -0.33
Col9a1Q05722 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
Col9a1Q05722 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.97□□□□□ -0.33
Col9a1Q05722 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Col9a1Q05722 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a1Q05722 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms