Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr5Q04683 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Cxcr5Q04683 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr5Q04683 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr5Q04683 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr5Q04683 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr5Q04683 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr5Q04683 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr5Q04683 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr5Q04683 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr5Q04683 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.5□□□□□ -0.41
Cxcr5Q04683 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr5Q04683 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr5Q04683 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr5Q04683 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr5Q04683 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr5Q04683 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr5Q04683 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr5Q04683 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr5Q04683 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr5Q04683 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr5Q04683 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.49□□□□□ -0.41
Cxcr5Q04683 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr5Q04683 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Cxcr5Q04683 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.49□□□□□ -0.41
Cxcr5Q04683 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.49□□□□□ -0.41
Cxcr5Q04683 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.49□□□□□ -0.41
Cxcr5Q04683 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cxcr5Q04683 Gm21854-201ENSMUST00000179901 471 ntBASIC12.49□□□□□ -0.41
Cxcr5Q04683 Gm37935-201ENSMUST00000192012 982 ntBASIC12.49□□□□□ -0.41
Cxcr5Q04683 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Cxcr5Q04683 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.49□□□□□ -0.41
Cxcr5Q04683 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr5Q04683 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr5Q04683 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr5Q04683 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr5Q04683 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr5Q04683 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Cxcr5Q04683 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr5Q04683 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr5Q04683 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr5Q04683 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cxcr5Q04683 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr5Q04683 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.49□□□□□ -0.41
Cxcr5Q04683 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.49□□□□□ -0.41
Cxcr5Q04683 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cxcr5Q04683 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Gm27306-201ENSMUST00000183970 107 ntBASIC12.48□□□□□ -0.41
Cxcr5Q04683 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.48□□□□□ -0.41
Cxcr5Q04683 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cxcr5Q04683 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr5Q04683 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.48□□□□□ -0.41
Cxcr5Q04683 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.48□□□□□ -0.41
Cxcr5Q04683 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cxcr5Q04683 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.48□□□□□ -0.41
Cxcr5Q04683 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr5Q04683 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.47□□□□□ -0.41
Cxcr5Q04683 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcr5Q04683 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cxcr5Q04683 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcr5Q04683 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Cxcr5Q04683 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcr5Q04683 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcr5Q04683 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.47□□□□□ -0.41
Cxcr5Q04683 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcr5Q04683 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.47□□□□□ -0.41
Cxcr5Q04683 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcr5Q04683 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms