Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GabpaQ00422 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GabpaQ00422 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GabpaQ00422 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
GabpaQ00422 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GabpaQ00422 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GabpaQ00422 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GabpaQ00422 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GabpaQ00422 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.85□□□□□ -0.03
GabpaQ00422 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.85□□□□□ -0.03
GabpaQ00422 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.85□□□□□ -0.03
GabpaQ00422 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GabpaQ00422 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GabpaQ00422 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GabpaQ00422 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GabpaQ00422 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
GabpaQ00422 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GabpaQ00422 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GabpaQ00422 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14.85□□□□□ -0.03
GabpaQ00422 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
GabpaQ00422 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GabpaQ00422 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GabpaQ00422 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GabpaQ00422 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GabpaQ00422 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.85□□□□□ -0.03
GabpaQ00422 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GabpaQ00422 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GabpaQ00422 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.84□□□□□ -0.03
GabpaQ00422 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GabpaQ00422 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GabpaQ00422 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GabpaQ00422 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GabpaQ00422 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GabpaQ00422 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GabpaQ00422 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.84□□□□□ -0.03
GabpaQ00422 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GabpaQ00422 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
GabpaQ00422 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.84□□□□□ -0.03
GabpaQ00422 Gm11964-201ENSMUST00000120982 444 ntBASIC14.84□□□□□ -0.03
GabpaQ00422 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14.84□□□□□ -0.03
GabpaQ00422 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.84□□□□□ -0.03
GabpaQ00422 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GabpaQ00422 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
GabpaQ00422 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.84□□□□□ -0.03
GabpaQ00422 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
GabpaQ00422 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.84□□□□□ -0.03
GabpaQ00422 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GabpaQ00422 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GabpaQ00422 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GabpaQ00422 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GabpaQ00422 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GabpaQ00422 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GabpaQ00422 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GabpaQ00422 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GabpaQ00422 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GabpaQ00422 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GabpaQ00422 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GabpaQ00422 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
GabpaQ00422 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GabpaQ00422 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.83□□□□□ -0.03
GabpaQ00422 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GabpaQ00422 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
GabpaQ00422 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
GabpaQ00422 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
GabpaQ00422 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GabpaQ00422 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
GabpaQ00422 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GabpaQ00422 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GabpaQ00422 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GabpaQ00422 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14.83□□□□□ -0.04
GabpaQ00422 Gm15236-201ENSMUST00000117309 379 ntBASIC14.83□□□□□ -0.04
GabpaQ00422 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GabpaQ00422 Gm14704-201ENSMUST00000120300 874 ntBASIC14.83□□□□□ -0.04
GabpaQ00422 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GabpaQ00422 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GabpaQ00422 Gm26083-201ENSMUST00000157904 193 ntBASIC14.83□□□□□ -0.04
GabpaQ00422 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GabpaQ00422 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GabpaQ00422 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14.83□□□□□ -0.04
GabpaQ00422 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.83□□□□□ -0.04
GabpaQ00422 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.83□□□□□ -0.04
GabpaQ00422 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
GabpaQ00422 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.83□□□□□ -0.04
GabpaQ00422 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.83□□□□□ -0.04
GabpaQ00422 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GabpaQ00422 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GabpaQ00422 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GabpaQ00422 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GabpaQ00422 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GabpaQ00422 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
GabpaQ00422 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
GabpaQ00422 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
GabpaQ00422 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GabpaQ00422 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GabpaQ00422 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GabpaQ00422 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
GabpaQ00422 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GabpaQ00422 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GabpaQ00422 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
GabpaQ00422 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms