Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Gm18018-201ENSMUST00000198273 408 ntBASIC13.34□□□□□ -0.27
Gabpb1Q00420 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabpb1Q00420 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Gm16372-201ENSMUST00000073088 450 ntBASIC13.34□□□□□ -0.27
Gabpb1Q00420 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.34□□□□□ -0.27
Gabpb1Q00420 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.34□□□□□ -0.27
Gabpb1Q00420 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.33□□□□□ -0.27
Gabpb1Q00420 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Gabpb1Q00420 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Gabpb1Q00420 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Gabpb1Q00420 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Gabpb1Q00420 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Gabpb1Q00420 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabpb1Q00420 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.33□□□□□ -0.28
Gabpb1Q00420 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Gm12928-201ENSMUST00000117115 573 ntBASIC13.33□□□□□ -0.28
Gabpb1Q00420 Gm16202-201ENSMUST00000117532 544 ntBASIC13.33□□□□□ -0.28
Gabpb1Q00420 Gm27701-201ENSMUST00000184498 110 ntBASIC13.33□□□□□ -0.28
Gabpb1Q00420 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Gm2495-201ENSMUST00000191160 466 ntBASIC13.33□□□□□ -0.28
Gabpb1Q00420 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.33□□□□□ -0.28
Gabpb1Q00420 Gm44069-201ENSMUST00000204898 506 ntBASIC13.33□□□□□ -0.28
Gabpb1Q00420 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.33□□□□□ -0.28
Gabpb1Q00420 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabpb1Q00420 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabpb1Q00420 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabpb1Q00420 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabpb1Q00420 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gabpb1Q00420 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.32□□□□□ -0.28
Gabpb1Q00420 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gabpb1Q00420 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gabpb1Q00420 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Gabpb1Q00420 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gabpb1Q00420 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gabpb1Q00420 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gabpb1Q00420 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gabpb1Q00420 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.32□□□□□ -0.28
Gabpb1Q00420 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gabpb1Q00420 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gabpb1Q00420 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.32□□□□□ -0.28
Gabpb1Q00420 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Gabpb1Q00420 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gabpb1Q00420 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.32□□□□□ -0.28
Gabpb1Q00420 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gabpb1Q00420 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gabpb1Q00420 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gabpb1Q00420 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gabpb1Q00420 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gabpb1Q00420 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gabpb1Q00420 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.32□□□□□ -0.28
Gabpb1Q00420 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gabpb1Q00420 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gabpb1Q00420 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gabpb1Q00420 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gabpb1Q00420 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gabpb1Q00420 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gabpb1Q00420 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gabpb1Q00420 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Gabpb1Q00420 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Gabpb1Q00420 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gabpb1Q00420 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gabpb1Q00420 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms