Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn1bP97952 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn1bP97952 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn1bP97952 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn1bP97952 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Scn1bP97952 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scn1bP97952 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Scn1bP97952 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.98□□□□□ -0.49
Scn1bP97952 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn1bP97952 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn1bP97952 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn1bP97952 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Scn1bP97952 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn1bP97952 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn1bP97952 Gm11745-201ENSMUST00000121669 448 ntBASIC11.98□□□□□ -0.49
Scn1bP97952 Rprl2-201ENSMUST00000157150 290 ntBASIC11.98□□□□□ -0.49
Scn1bP97952 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Scn1bP97952 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Scn1bP97952 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.98□□□□□ -0.49
Scn1bP97952 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn1bP97952 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scn1bP97952 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Scn1bP97952 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn1bP97952 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scn1bP97952 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn1bP97952 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scn1bP97952 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Scn1bP97952 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn1bP97952 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.98□□□□□ -0.49
Scn1bP97952 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn1bP97952 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn1bP97952 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn1bP97952 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn1bP97952 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scn1bP97952 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn1bP97952 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Scn1bP97952 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Scn1bP97952 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn1bP97952 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.97□□□□□ -0.49
Scn1bP97952 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Scn1bP97952 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Scn1bP97952 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.97□□□□□ -0.49
Scn1bP97952 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Scn1bP97952 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.97□□□□□ -0.49
Scn1bP97952 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn1bP97952 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.97□□□□□ -0.49
Scn1bP97952 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Scn1bP97952 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Scn1bP97952 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn1bP97952 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scn1bP97952 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn1bP97952 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn1bP97952 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Scn1bP97952 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.97□□□□□ -0.49
Scn1bP97952 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scn1bP97952 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scn1bP97952 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn1bP97952 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC11.97□□□□□ -0.49
Scn1bP97952 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scn1bP97952 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.97□□□□□ -0.49
Scn1bP97952 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scn1bP97952 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.97□□□□□ -0.49
Scn1bP97952 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn1bP97952 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scn1bP97952 Gm10175-201ENSMUST00000086013 645 ntBASIC11.97□□□□□ -0.49
Scn1bP97952 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn1bP97952 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn1bP97952 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn1bP97952 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn1bP97952 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn1bP97952 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Scn1bP97952 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scn1bP97952 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Scn1bP97952 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
Scn1bP97952 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn1bP97952 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scn1bP97952 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.97□□□□□ -0.49
Scn1bP97952 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn1bP97952 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn1bP97952 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Scn1bP97952 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.96□□□□□ -0.49
Scn1bP97952 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.96□□□□□ -0.49
Scn1bP97952 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn1bP97952 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn1bP97952 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn1bP97952 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Scn1bP97952 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn1bP97952 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn1bP97952 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn1bP97952 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn1bP97952 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn1bP97952 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.96□□□□□ -0.49
Scn1bP97952 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn1bP97952 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11.96□□□□□ -0.49
Scn1bP97952 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Scn1bP97952 Gm2810-201ENSMUST00000118681 990 ntBASIC11.96□□□□□ -0.49
Scn1bP97952 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.96□□□□□ -0.49
Scn1bP97952 Gm11594-201ENSMUST00000122313 162 ntBASIC11.96□□□□□ -0.49
Scn1bP97952 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.96□□□□□ -0.49
Scn1bP97952 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms