Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcbP82349 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.72□□□□□ -0.53
SgcbP82349 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcbP82349 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SgcbP82349 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcbP82349 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SgcbP82349 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.72□□□□□ -0.53
SgcbP82349 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.72□□□□□ -0.53
SgcbP82349 Gm14350-201ENSMUST00000116642 640 ntBASIC11.72□□□□□ -0.53
SgcbP82349 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SgcbP82349 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcbP82349 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.72□□□□□ -0.53
SgcbP82349 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcbP82349 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.72□□□□□ -0.53
SgcbP82349 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.72□□□□□ -0.53
SgcbP82349 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcbP82349 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcbP82349 Gm10012-201ENSMUST00000078252 192 ntBASIC11.72□□□□□ -0.53
SgcbP82349 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
SgcbP82349 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
SgcbP82349 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SgcbP82349 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcbP82349 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SgcbP82349 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcbP82349 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcbP82349 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcbP82349 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcbP82349 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcbP82349 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SgcbP82349 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.71□□□□□ -0.53
SgcbP82349 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
SgcbP82349 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.53
SgcbP82349 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
SgcbP82349 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
SgcbP82349 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
SgcbP82349 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
SgcbP82349 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.71□□□□□ -0.53
SgcbP82349 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 Gm12106-201ENSMUST00000116006 1200 ntBASIC11.71□□□□□ -0.53
SgcbP82349 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 Gm12390-201ENSMUST00000117897 397 ntBASIC11.71□□□□□ -0.53
SgcbP82349 Gm11618-201ENSMUST00000117946 267 ntBASIC11.71□□□□□ -0.53
SgcbP82349 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
SgcbP82349 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.71□□□□□ -0.53
SgcbP82349 Proscos-202ENSMUST00000178990 666 ntBASIC11.71□□□□□ -0.53
SgcbP82349 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC11.71□□□□□ -0.53
SgcbP82349 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.71□□□□□ -0.53
SgcbP82349 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.71□□□□□ -0.53
SgcbP82349 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC11.71□□□□□ -0.53
SgcbP82349 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
SgcbP82349 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.71□□□□□ -0.53
SgcbP82349 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.71□□□□□ -0.53
SgcbP82349 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 Gm8598-201ENSMUST00000221184 836 ntBASIC11.71□□□□□ -0.53
SgcbP82349 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcbP82349 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
SgcbP82349 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
SgcbP82349 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SgcbP82349 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.71□□□□□ -0.54
SgcbP82349 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.71□□□□□ -0.54
SgcbP82349 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SgcbP82349 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SgcbP82349 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SgcbP82349 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SgcbP82349 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.71□□□□□ -0.54
SgcbP82349 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
SgcbP82349 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SgcbP82349 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
SgcbP82349 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.7□□□□□ -0.54
SgcbP82349 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcbP82349 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcbP82349 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
SgcbP82349 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SgcbP82349 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcbP82349 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.7□□□□□ -0.54
SgcbP82349 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.7□□□□□ -0.54
SgcbP82349 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms