Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.96□□□□□ -0.34
Shox2P70390 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.96□□□□□ -0.34
Shox2P70390 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shox2P70390 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shox2P70390 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shox2P70390 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Shox2P70390 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shox2P70390 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shox2P70390 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shox2P70390 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.95□□□□□ -0.34
Shox2P70390 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.95□□□□□ -0.34
Shox2P70390 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shox2P70390 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shox2P70390 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shox2P70390 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shox2P70390 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shox2P70390 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Shox2P70390 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.95□□□□□ -0.34
Shox2P70390 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shox2P70390 Gm15460-201ENSMUST00000118147 391 ntBASIC12.95□□□□□ -0.34
Shox2P70390 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shox2P70390 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.95□□□□□ -0.34
Shox2P70390 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.95□□□□□ -0.34
Shox2P70390 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.95□□□□□ -0.34
Shox2P70390 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.95□□□□□ -0.34
Shox2P70390 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shox2P70390 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shox2P70390 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shox2P70390 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shox2P70390 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Shox2P70390 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Shox2P70390 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.95□□□□□ -0.34
Shox2P70390 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shox2P70390 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shox2P70390 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shox2P70390 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.95□□□□□ -0.34
Shox2P70390 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shox2P70390 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shox2P70390 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.95□□□□□ -0.34
Shox2P70390 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shox2P70390 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shox2P70390 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Shox2P70390 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Shox2P70390 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Shox2P70390 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.94□□□□□ -0.34
Shox2P70390 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.94□□□□□ -0.34
Shox2P70390 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.94□□□□□ -0.34
Shox2P70390 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.94□□□□□ -0.34
Shox2P70390 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.94□□□□□ -0.34
Shox2P70390 Gm12403-201ENSMUST00000121384 959 ntBASIC12.94□□□□□ -0.34
Shox2P70390 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.94□□□□□ -0.34
Shox2P70390 Gm9719-201ENSMUST00000162765 543 ntBASIC12.94□□□□□ -0.34
Shox2P70390 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.94□□□□□ -0.34
Shox2P70390 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.94□□□□□ -0.34
Shox2P70390 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.94□□□□□ -0.34
Shox2P70390 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.94□□□□□ -0.34
Shox2P70390 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.94□□□□□ -0.34
Shox2P70390 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
Shox2P70390 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Shox2P70390 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Shox2P70390 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shox2P70390 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Shox2P70390 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.93□□□□□ -0.34
Shox2P70390 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms