Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Pdlim4P70271 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.95□□□□□ -0.66
Pdlim4P70271 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Pdlim4P70271 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.95□□□□□ -0.66
Pdlim4P70271 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Pdlim4P70271 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Pdlim4P70271 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Pdlim4P70271 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.95□□□□□ -0.66
Pdlim4P70271 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.95□□□□□ -0.66
Pdlim4P70271 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.95□□□□□ -0.66
Pdlim4P70271 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.95□□□□□ -0.66
Pdlim4P70271 Gm26315-201ENSMUST00000083890 321 ntBASIC10.95□□□□□ -0.66
Pdlim4P70271 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.95□□□□□ -0.66
Pdlim4P70271 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Pdlim4P70271 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.95□□□□□ -0.66
Pdlim4P70271 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.95□□□□□ -0.66
Pdlim4P70271 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.95□□□□□ -0.66
Pdlim4P70271 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Pdlim4P70271 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdlim4P70271 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pdlim4P70271 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Pdlim4P70271 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pdlim4P70271 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Gm4782-201ENSMUST00000168705 2046 ntBASIC10.94□□□□□ -0.66
Pdlim4P70271 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Pdlim4P70271 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pdlim4P70271 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Gm8775-201ENSMUST00000170943 1327 ntBASIC10.94□□□□□ -0.66
Pdlim4P70271 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC10.94□□□□□ -0.66
Pdlim4P70271 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pdlim4P70271 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Pdlim4P70271 Gm10327-201ENSMUST00000105222 1002 ntBASIC10.94□□□□□ -0.66
Pdlim4P70271 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Pdlim4P70271 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.94□□□□□ -0.66
Pdlim4P70271 Gm9002-201ENSMUST00000178437 499 ntBASIC10.94□□□□□ -0.66
Pdlim4P70271 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pdlim4P70271 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.94□□□□□ -0.66
Pdlim4P70271 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.94□□□□□ -0.66
Pdlim4P70271 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Pdlim4P70271 Gm5356-201ENSMUST00000093326 615 ntBASIC10.94□□□□□ -0.66
Pdlim4P70271 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Pdlim4P70271 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Pdlim4P70271 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pdlim4P70271 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.94□□□□□ -0.66
Pdlim4P70271 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pdlim4P70271 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Pdlim4P70271 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms