Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ybx1P62960 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Ybx1P62960 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ybx1P62960 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ybx1P62960 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ybx1P62960 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ybx1P62960 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ybx1P62960 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ybx1P62960 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ybx1P62960 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.42□□□□□ -0.26
Ybx1P62960 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ybx1P62960 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.42□□□□□ -0.26
Ybx1P62960 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ybx1P62960 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ybx1P62960 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.42□□□□□ -0.26
Ybx1P62960 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ybx1P62960 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ybx1P62960 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ybx1P62960 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ybx1P62960 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ybx1P62960 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Ybx1P62960 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ybx1P62960 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ybx1P62960 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ybx1P62960 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ybx1P62960 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ybx1P62960 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Ybx1P62960 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ybx1P62960 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.42□□□□□ -0.26
Ybx1P62960 Gm11964-201ENSMUST00000120982 444 ntBASIC13.42□□□□□ -0.26
Ybx1P62960 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.42□□□□□ -0.26
Ybx1P62960 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.42□□□□□ -0.26
Ybx1P62960 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.42□□□□□ -0.26
Ybx1P62960 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ybx1P62960 Gm25668-201ENSMUST00000157700 129 ntBASIC13.42□□□□□ -0.26
Ybx1P62960 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.42□□□□□ -0.26
Ybx1P62960 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Ybx1P62960 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.42□□□□□ -0.26
Ybx1P62960 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.42□□□□□ -0.26
Ybx1P62960 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ybx1P62960 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ybx1P62960 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ybx1P62960 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ybx1P62960 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Ybx1P62960 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ybx1P62960 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ybx1P62960 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.42□□□□□ -0.26
Ybx1P62960 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Ybx1P62960 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ybx1P62960 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ybx1P62960 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ybx1P62960 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ybx1P62960 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ybx1P62960 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ybx1P62960 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Ybx1P62960 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ybx1P62960 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ybx1P62960 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ybx1P62960 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ybx1P62960 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Ybx1P62960 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ybx1P62960 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ybx1P62960 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ybx1P62960 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ybx1P62960 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ybx1P62960 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ybx1P62960 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ybx1P62960 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ybx1P62960 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ybx1P62960 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ybx1P62960 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ybx1P62960 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ybx1P62960 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ybx1P62960 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ybx1P62960 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ybx1P62960 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Ybx1P62960 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.41□□□□□ -0.26
Ybx1P62960 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ybx1P62960 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.41□□□□□ -0.26
Ybx1P62960 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.41□□□□□ -0.26
Ybx1P62960 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Ybx1P62960 Gm37444-201ENSMUST00000193605 439 ntBASIC13.41□□□□□ -0.26
Ybx1P62960 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ybx1P62960 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.41□□□□□ -0.26
Ybx1P62960 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Ybx1P62960 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Ybx1P62960 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.41□□□□□ -0.26
Ybx1P62960 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ybx1P62960 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ybx1P62960 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ybx1P62960 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ybx1P62960 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ybx1P62960 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ybx1P62960 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ybx1P62960 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ybx1P62960 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ybx1P62960 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ybx1P62960 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.4□□□□□ -0.26
Ybx1P62960 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ybx1P62960 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms