Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm3P62311 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.93□□□□□ -0.5
Lsm3P62311 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm3P62311 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm3P62311 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm3P62311 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm3P62311 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm3P62311 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Lsm3P62311 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.93□□□□□ -0.5
Lsm3P62311 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm3P62311 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Lsm3P62311 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.93□□□□□ -0.5
Lsm3P62311 Gm27459-201ENSMUST00000184860 107 ntBASIC11.93□□□□□ -0.5
Lsm3P62311 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC11.93□□□□□ -0.5
Lsm3P62311 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.93□□□□□ -0.5
Lsm3P62311 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Lsm3P62311 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.93□□□□□ -0.5
Lsm3P62311 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm3P62311 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm3P62311 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.93□□□□□ -0.5
Lsm3P62311 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm3P62311 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm3P62311 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Lsm3P62311 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm3P62311 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm3P62311 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm3P62311 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm3P62311 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm3P62311 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm3P62311 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Lsm3P62311 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Lsm3P62311 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Lsm3P62311 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm3P62311 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.92□□□□□ -0.5
Lsm3P62311 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm3P62311 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.92□□□□□ -0.5
Lsm3P62311 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.92□□□□□ -0.5
Lsm3P62311 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Lsm3P62311 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm3P62311 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm3P62311 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm3P62311 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm3P62311 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm3P62311 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm3P62311 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Lsm3P62311 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm3P62311 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm3P62311 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.92□□□□□ -0.5
Lsm3P62311 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm3P62311 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.92□□□□□ -0.5
Lsm3P62311 Gm10060-201ENSMUST00000212002 111 ntBASIC11.92□□□□□ -0.5
Lsm3P62311 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm3P62311 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Lsm3P62311 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm3P62311 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm3P62311 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm3P62311 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm3P62311 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Lsm3P62311 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm3P62311 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm3P62311 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm3P62311 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm3P62311 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm3P62311 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm3P62311 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm3P62311 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm3P62311 Daam2-202ENSMUST00000224595 1926 ntBASIC11.92□□□□□ -0.5
Lsm3P62311 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm3P62311 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Lsm3P62311 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.91□□□□□ -0.5
Lsm3P62311 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Lsm3P62311 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Gm6222-201ENSMUST00000120787 396 ntBASIC11.91□□□□□ -0.5
Lsm3P62311 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.91□□□□□ -0.5
Lsm3P62311 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Lsm3P62311 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.91□□□□□ -0.5
Lsm3P62311 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.91□□□□□ -0.5
Lsm3P62311 Gm34391-201ENSMUST00000203706 907 ntBASIC11.91□□□□□ -0.5
Lsm3P62311 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.91□□□□□ -0.5
Lsm3P62311 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms