Protein–RNA interactions for Protein: P61264

Stx1b, Syntaxin-1B, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1bP61264 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Stx1bP61264 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Stx1bP61264 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Stx1bP61264 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Stx1bP61264 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Stx1bP61264 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Stx1bP61264 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Stx1bP61264 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Stx1bP61264 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Stx1bP61264 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.83□□□□□ -0.35
Stx1bP61264 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Stx1bP61264 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Stx1bP61264 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Stx1bP61264 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Stx1bP61264 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Stx1bP61264 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Stx1bP61264 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.83□□□□□ -0.36
Stx1bP61264 Mir449b-201ENSMUST00000104833 80 ntBASIC12.83□□□□□ -0.36
Stx1bP61264 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Stx1bP61264 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Stx1bP61264 Gm4995-201ENSMUST00000117247 432 ntBASIC12.83□□□□□ -0.36
Stx1bP61264 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.83□□□□□ -0.36
Stx1bP61264 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Stx1bP61264 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Stx1bP61264 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Stx1bP61264 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Stx1bP61264 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Stx1bP61264 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Stx1bP61264 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Stx1bP61264 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Stx1bP61264 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Stx1bP61264 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Stx1bP61264 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.83□□□□□ -0.36
Stx1bP61264 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Stx1bP61264 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Stx1bP61264 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Stx1bP61264 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Stx1bP61264 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Stx1bP61264 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Stx1bP61264 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.83□□□□□ -0.36
Stx1bP61264 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Stx1bP61264 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.83□□□□□ -0.36
Stx1bP61264 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Stx1bP61264 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Stx1bP61264 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Stx1bP61264 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Stx1bP61264 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Stx1bP61264 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.82□□□□□ -0.36
Stx1bP61264 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Stx1bP61264 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Stx1bP61264 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Stx1bP61264 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Stx1bP61264 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Stx1bP61264 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Stx1bP61264 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Stx1bP61264 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.82□□□□□ -0.36
Stx1bP61264 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Stx1bP61264 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Stx1bP61264 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Stx1bP61264 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Stx1bP61264 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Stx1bP61264 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Stx1bP61264 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Stx1bP61264 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Stx1bP61264 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.82□□□□□ -0.36
Stx1bP61264 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.82□□□□□ -0.36
Stx1bP61264 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.82□□□□□ -0.36
Stx1bP61264 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Stx1bP61264 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.82□□□□□ -0.36
Stx1bP61264 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.82□□□□□ -0.36
Stx1bP61264 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Stx1bP61264 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Stx1bP61264 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
Stx1bP61264 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Stx1bP61264 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Stx1bP61264 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Stx1bP61264 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Stx1bP61264 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Stx1bP61264 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Stx1bP61264 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Stx1bP61264 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Stx1bP61264 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Stx1bP61264 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.81□□□□□ -0.36
Stx1bP61264 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.81□□□□□ -0.36
Stx1bP61264 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Stx1bP61264 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.81□□□□□ -0.36
Stx1bP61264 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Stx1bP61264 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Stx1bP61264 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Stx1bP61264 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.81□□□□□ -0.36
Stx1bP61264 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Stx1bP61264 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Stx1bP61264 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Stx1bP61264 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Stx1bP61264 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Stx1bP61264 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Stx1bP61264 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Stx1bP61264 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Stx1bP61264 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Stx1bP61264 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms