Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.16□□□□□ -0.14
Nub1P54729 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nub1P54729 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nub1P54729 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nub1P54729 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.15□□□□□ -0.14
Nub1P54729 Mir1894-201ENSMUST00000122802 81 ntBASIC14.15□□□□□ -0.14
Nub1P54729 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.15□□□□□ -0.14
Nub1P54729 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.15□□□□□ -0.14
Nub1P54729 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.15□□□□□ -0.14
Nub1P54729 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.15□□□□□ -0.14
Nub1P54729 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Nub1P54729 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nub1P54729 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
Nub1P54729 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nub1P54729 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nub1P54729 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Nub1P54729 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nub1P54729 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nub1P54729 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nub1P54729 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nub1P54729 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nub1P54729 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
Nub1P54729 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nub1P54729 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nub1P54729 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nub1P54729 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nub1P54729 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nub1P54729 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.14□□□□□ -0.15
Nub1P54729 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nub1P54729 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nub1P54729 Mir7221-201ENSMUST00000184009 72 ntBASIC14.14□□□□□ -0.15
Nub1P54729 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.14□□□□□ -0.15
Nub1P54729 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.14□□□□□ -0.15
Nub1P54729 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.14□□□□□ -0.15
Nub1P54729 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nub1P54729 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nub1P54729 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nub1P54729 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Nub1P54729 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nub1P54729 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nub1P54729 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Nub1P54729 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nub1P54729 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Nub1P54729 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nub1P54729 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nub1P54729 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Nub1P54729 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nub1P54729 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Nub1P54729 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nub1P54729 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nub1P54729 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nub1P54729 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nub1P54729 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nub1P54729 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nub1P54729 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nub1P54729 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Nub1P54729 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.13□□□□□ -0.15
Nub1P54729 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nub1P54729 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Nub1P54729 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.13□□□□□ -0.15
Nub1P54729 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nub1P54729 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.13□□□□□ -0.15
Nub1P54729 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nub1P54729 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nub1P54729 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nub1P54729 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms