Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh6P54276 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Msh6P54276 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh6P54276 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Msh6P54276 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh6P54276 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh6P54276 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh6P54276 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Msh6P54276 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh6P54276 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh6P54276 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Msh6P54276 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh6P54276 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh6P54276 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Msh6P54276 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh6P54276 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh6P54276 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh6P54276 Gm12217-201ENSMUST00000118858 696 ntBASIC16.51■□□□□ 0.23
Msh6P54276 Gm4760-201ENSMUST00000119663 1030 ntBASIC16.51■□□□□ 0.23
Msh6P54276 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Msh6P54276 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Msh6P54276 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh6P54276 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Msh6P54276 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Msh6P54276 Gm9678-201ENSMUST00000198979 1149 ntBASIC16.51■□□□□ 0.23
Msh6P54276 Ighv8-10-201ENSMUST00000199579 358 ntBASIC16.51■□□□□ 0.23
Msh6P54276 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC16.51■□□□□ 0.23
Msh6P54276 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC16.51■□□□□ 0.23
Msh6P54276 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh6P54276 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh6P54276 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC16.51■□□□□ 0.23
Msh6P54276 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh6P54276 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh6P54276 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh6P54276 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC16.5■□□□□ 0.23
Msh6P54276 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Msh6P54276 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh6P54276 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Msh6P54276 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Msh6P54276 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh6P54276 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Msh6P54276 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh6P54276 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh6P54276 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh6P54276 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh6P54276 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh6P54276 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Msh6P54276 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh6P54276 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Msh6P54276 Gm12566-201ENSMUST00000121479 359 ntBASIC16.5■□□□□ 0.23
Msh6P54276 Gm12291-201ENSMUST00000121627 311 ntBASIC16.5■□□□□ 0.23
Msh6P54276 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Msh6P54276 Gm2546-201ENSMUST00000182630 991 ntBASIC16.5■□□□□ 0.23
Msh6P54276 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC16.5■□□□□ 0.23
Msh6P54276 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Msh6P54276 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh6P54276 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Msh6P54276 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC16.5■□□□□ 0.23
Msh6P54276 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh6P54276 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh6P54276 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.5■□□□□ 0.23
Msh6P54276 Gm19221-201ENSMUST00000221827 1477 ntBASIC16.5■□□□□ 0.23
Msh6P54276 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Msh6P54276 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh6P54276 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh6P54276 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Msh6P54276 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh6P54276 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh6P54276 Gm37795-201ENSMUST00000194216 2459 ntBASIC16.49■□□□□ 0.23
Msh6P54276 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh6P54276 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh6P54276 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh6P54276 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC16.49■□□□□ 0.23
Msh6P54276 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Msh6P54276 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh6P54276 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh6P54276 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC16.49■□□□□ 0.23
Msh6P54276 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh6P54276 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh6P54276 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Msh6P54276 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.49■□□□□ 0.23
Msh6P54276 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Msh6P54276 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Msh6P54276 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh6P54276 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh6P54276 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Msh6P54276 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.49■□□□□ 0.23
Msh6P54276 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.49■□□□□ 0.23
Msh6P54276 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh6P54276 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Msh6P54276 Gm11930-201ENSMUST00000117788 190 ntBASIC16.49■□□□□ 0.23
Msh6P54276 Gm14263-201ENSMUST00000117955 746 ntBASIC16.49■□□□□ 0.23
Msh6P54276 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC16.49■□□□□ 0.23
Msh6P54276 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC16.49■□□□□ 0.23
Msh6P54276 Gm34767-201ENSMUST00000191813 1062 ntBASIC16.49■□□□□ 0.23
Msh6P54276 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Msh6P54276 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC16.49■□□□□ 0.23
Msh6P54276 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh6P54276 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh6P54276 Gm5939-201ENSMUST00000119613 2874 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms