Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Atxn1P54254 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.04□□□□□ -0.32
Atxn1P54254 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.04□□□□□ -0.32
Atxn1P54254 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atxn1P54254 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atxn1P54254 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Atxn1P54254 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.03□□□□□ -0.32
Atxn1P54254 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atxn1P54254 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atxn1P54254 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Atxn1P54254 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.03□□□□□ -0.32
Atxn1P54254 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atxn1P54254 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Atxn1P54254 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Atxn1P54254 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Atxn1P54254 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Atxn1P54254 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atxn1P54254 Gm8805-201ENSMUST00000117848 313 ntBASIC13.03□□□□□ -0.32
Atxn1P54254 Gm11591-201ENSMUST00000120063 702 ntBASIC13.03□□□□□ -0.32
Atxn1P54254 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atxn1P54254 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atxn1P54254 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atxn1P54254 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.03□□□□□ -0.32
Atxn1P54254 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.03□□□□□ -0.32
Atxn1P54254 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.03□□□□□ -0.32
Atxn1P54254 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atxn1P54254 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.03□□□□□ -0.32
Atxn1P54254 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.03□□□□□ -0.32
Atxn1P54254 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.03□□□□□ -0.32
Atxn1P54254 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atxn1P54254 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atxn1P54254 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atxn1P54254 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atxn1P54254 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Atxn1P54254 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.03□□□□□ -0.32
Atxn1P54254 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Atxn1P54254 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atxn1P54254 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atxn1P54254 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Atxn1P54254 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atxn1P54254 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
Atxn1P54254 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Atxn1P54254 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.02□□□□□ -0.32
Atxn1P54254 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.02□□□□□ -0.32
Atxn1P54254 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Atxn1P54254 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Atxn1P54254 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Atxn1P54254 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.02□□□□□ -0.32
Atxn1P54254 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Atxn1P54254 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Atxn1P54254 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Atxn1P54254 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Atxn1P54254 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Atxn1P54254 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atxn1P54254 Gm11618-201ENSMUST00000117946 267 ntBASIC13.02□□□□□ -0.33
Atxn1P54254 Gm11222-201ENSMUST00000119005 738 ntBASIC13.02□□□□□ -0.33
Atxn1P54254 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atxn1P54254 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atxn1P54254 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.02□□□□□ -0.33
Atxn1P54254 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atxn1P54254 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.02□□□□□ -0.33
Atxn1P54254 Gm29608-201ENSMUST00000190444 463 ntBASIC13.02□□□□□ -0.33
Atxn1P54254 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.02□□□□□ -0.33
Atxn1P54254 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.02□□□□□ -0.33
Atxn1P54254 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.02□□□□□ -0.33
Atxn1P54254 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13.02□□□□□ -0.33
Atxn1P54254 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atxn1P54254 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.02□□□□□ -0.33
Atxn1P54254 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atxn1P54254 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atxn1P54254 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.02□□□□□ -0.33
Atxn1P54254 Gm26315-201ENSMUST00000083890 321 ntBASIC13.02□□□□□ -0.33
Atxn1P54254 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.02□□□□□ -0.33
Atxn1P54254 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Atxn1P54254 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atxn1P54254 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Atxn1P54254 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atxn1P54254 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atxn1P54254 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.02□□□□□ -0.33
Atxn1P54254 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atxn1P54254 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Atxn1P54254 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms