Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox1P53783 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox1P53783 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Sox1P53783 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox1P53783 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox1P53783 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox1P53783 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Sox1P53783 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.34□□□□□ -0.27
Sox1P53783 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox1P53783 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox1P53783 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox1P53783 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox1P53783 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox1P53783 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox1P53783 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox1P53783 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox1P53783 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox1P53783 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.34□□□□□ -0.27
Sox1P53783 Gm23251-201ENSMUST00000103773 110 ntBASIC13.34□□□□□ -0.27
Sox1P53783 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sox1P53783 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.34□□□□□ -0.27
Sox1P53783 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.34□□□□□ -0.27
Sox1P53783 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox1P53783 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sox1P53783 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox1P53783 Gm3793-201ENSMUST00000204973 672 ntBASIC13.34□□□□□ -0.27
Sox1P53783 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.34□□□□□ -0.27
Sox1P53783 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.34□□□□□ -0.27
Sox1P53783 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Sox1P53783 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC13.34□□□□□ -0.27
Sox1P53783 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.34□□□□□ -0.27
Sox1P53783 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox1P53783 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Sox1P53783 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox1P53783 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox1P53783 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox1P53783 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox1P53783 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox1P53783 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.34□□□□□ -0.27
Sox1P53783 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox1P53783 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox1P53783 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox1P53783 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox1P53783 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox1P53783 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox1P53783 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Sox1P53783 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sox1P53783 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sox1P53783 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sox1P53783 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Sox1P53783 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox1P53783 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox1P53783 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox1P53783 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox1P53783 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox1P53783 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.33□□□□□ -0.28
Sox1P53783 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sox1P53783 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox1P53783 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox1P53783 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox1P53783 Gm14058-201ENSMUST00000116082 735 ntBASIC13.33□□□□□ -0.28
Sox1P53783 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.33□□□□□ -0.28
Sox1P53783 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.33□□□□□ -0.28
Sox1P53783 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.33□□□□□ -0.28
Sox1P53783 Gm43778-201ENSMUST00000199438 199 ntBASIC13.33□□□□□ -0.28
Sox1P53783 Gm6867-201ENSMUST00000219165 425 ntBASIC13.33□□□□□ -0.28
Sox1P53783 AC126799.1-201ENSMUST00000221976 246 ntBASIC13.33□□□□□ -0.28
Sox1P53783 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13.33□□□□□ -0.28
Sox1P53783 Prrxl1-205ENSMUST00000228878 723 ntBASIC13.33□□□□□ -0.28
Sox1P53783 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox1P53783 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox1P53783 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox1P53783 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox1P53783 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox1P53783 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox1P53783 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox1P53783 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox1P53783 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox1P53783 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox1P53783 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox1P53783 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox1P53783 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox1P53783 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox1P53783 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox1P53783 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox1P53783 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox1P53783 Gm3765-201ENSMUST00000130985 1447 ntBASIC13.32□□□□□ -0.28
Sox1P53783 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox1P53783 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.32□□□□□ -0.28
Sox1P53783 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox1P53783 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox1P53783 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox1P53783 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox1P53783 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox1P53783 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.32□□□□□ -0.28
Sox1P53783 Gm12058-201ENSMUST00000118614 437 ntBASIC13.32□□□□□ -0.28
Sox1P53783 Gm15711-201ENSMUST00000118889 535 ntBASIC13.32□□□□□ -0.28
Sox1P53783 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox1P53783 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.32□□□□□ -0.28
Sox1P53783 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms