Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.69□□□□□ -0.38
Lbx1P52955 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lbx1P52955 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lbx1P52955 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lbx1P52955 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lbx1P52955 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lbx1P52955 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lbx1P52955 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lbx1P52955 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.69□□□□□ -0.38
Lbx1P52955 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lbx1P52955 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lbx1P52955 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lbx1P52955 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Lbx1P52955 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.69□□□□□ -0.38
Lbx1P52955 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lbx1P52955 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lbx1P52955 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Lbx1P52955 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lbx1P52955 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Lbx1P52955 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lbx1P52955 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Lbx1P52955 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Lbx1P52955 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lbx1P52955 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lbx1P52955 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.68□□□□□ -0.38
Lbx1P52955 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lbx1P52955 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lbx1P52955 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lbx1P52955 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lbx1P52955 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lbx1P52955 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Lbx1P52955 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Lbx1P52955 Gm12036-201ENSMUST00000120008 530 ntBASIC12.68□□□□□ -0.38
Lbx1P52955 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lbx1P52955 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.68□□□□□ -0.38
Lbx1P52955 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Lbx1P52955 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lbx1P52955 Gm5298-201ENSMUST00000201122 892 ntBASIC12.68□□□□□ -0.38
Lbx1P52955 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.68□□□□□ -0.38
Lbx1P52955 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.68□□□□□ -0.38
Lbx1P52955 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.68□□□□□ -0.38
Lbx1P52955 Gm9132-201ENSMUST00000210182 832 ntBASIC12.68□□□□□ -0.38
Lbx1P52955 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.68□□□□□ -0.38
Lbx1P52955 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lbx1P52955 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lbx1P52955 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lbx1P52955 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lbx1P52955 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lbx1P52955 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lbx1P52955 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lbx1P52955 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lbx1P52955 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.68□□□□□ -0.38
Lbx1P52955 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lbx1P52955 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lbx1P52955 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lbx1P52955 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Lbx1P52955 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lbx1P52955 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lbx1P52955 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lbx1P52955 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lbx1P52955 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lbx1P52955 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Lbx1P52955 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lbx1P52955 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lbx1P52955 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Lbx1P52955 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lbx1P52955 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Lbx1P52955 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lbx1P52955 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lbx1P52955 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lbx1P52955 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lbx1P52955 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.67□□□□□ -0.38
Lbx1P52955 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lbx1P52955 Gm14058-201ENSMUST00000116082 735 ntBASIC12.67□□□□□ -0.38
Lbx1P52955 Gm15036-201ENSMUST00000118880 400 ntBASIC12.67□□□□□ -0.38
Lbx1P52955 Gm5257-201ENSMUST00000121823 790 ntBASIC12.67□□□□□ -0.38
Lbx1P52955 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.67□□□□□ -0.38
Lbx1P52955 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.67□□□□□ -0.38
Lbx1P52955 Gm45120-201ENSMUST00000208880 408 ntBASIC12.67□□□□□ -0.38
Lbx1P52955 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC12.67□□□□□ -0.38
Lbx1P52955 Gm6722-201ENSMUST00000221586 390 ntBASIC12.67□□□□□ -0.38
Lbx1P52955 Gm1821-202ENSMUST00000227415 750 ntBASIC12.67□□□□□ -0.38
Lbx1P52955 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lbx1P52955 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Lbx1P52955 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lbx1P52955 Efs-202ENSMUST00000227037 2540 ntBASIC12.67□□□□□ -0.38
Lbx1P52955 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lbx1P52955 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.67□□□□□ -0.38
Lbx1P52955 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lbx1P52955 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lbx1P52955 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lbx1P52955 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Lbx1P52955 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lbx1P52955 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lbx1P52955 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.66□□□□□ -0.38
Lbx1P52955 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.66□□□□□ -0.38
Lbx1P52955 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lbx1P52955 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lbx1P52955 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lbx1P52955 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms