Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-1P50220 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-1P50220 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Nkx2-1P50220 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Nkx2-1P50220 AC168058.1-201ENSMUST00000219521 2282 ntBASIC10.87□□□□□ -0.67
Nkx2-1P50220 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-1P50220 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-1P50220 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Nkx2-1P50220 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-1P50220 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.87□□□□□ -0.67
Nkx2-1P50220 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.87□□□□□ -0.67
Nkx2-1P50220 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-1P50220 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.86□□□□□ -0.67
Nkx2-1P50220 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Gm13859-201ENSMUST00000119936 1423 ntBASIC10.86□□□□□ -0.67
Nkx2-1P50220 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Matn2-203ENSMUST00000226766 3252 ntBASIC10.86□□□□□ -0.67
Nkx2-1P50220 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms