Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.59■□□□□ 0.09
Ercc3P49135 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ercc3P49135 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ercc3P49135 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.59■□□□□ 0.09
Ercc3P49135 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ercc3P49135 Gm8805-201ENSMUST00000117848 313 ntBASIC15.59■□□□□ 0.09
Ercc3P49135 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.59■□□□□ 0.09
Ercc3P49135 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.59■□□□□ 0.09
Ercc3P49135 Gm10156-201ENSMUST00000122364 462 ntBASIC15.59■□□□□ 0.09
Ercc3P49135 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC15.59■□□□□ 0.09
Ercc3P49135 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ercc3P49135 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ercc3P49135 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ercc3P49135 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.59■□□□□ 0.09
Ercc3P49135 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.59■□□□□ 0.09
Ercc3P49135 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ercc3P49135 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.59■□□□□ 0.09
Ercc3P49135 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.59■□□□□ 0.09
Ercc3P49135 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ercc3P49135 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.59■□□□□ 0.09
Ercc3P49135 Gm45841-201ENSMUST00000207700 164 ntBASIC15.59■□□□□ 0.09
Ercc3P49135 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ercc3P49135 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Ercc3P49135 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ercc3P49135 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ercc3P49135 Gm43677-201ENSMUST00000198098 2378 ntBASIC15.59■□□□□ 0.09
Ercc3P49135 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ercc3P49135 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ercc3P49135 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Ercc3P49135 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Ercc3P49135 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ercc3P49135 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ercc3P49135 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ercc3P49135 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ercc3P49135 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.59■□□□□ 0.09
Ercc3P49135 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ercc3P49135 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ercc3P49135 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Ercc3P49135 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ercc3P49135 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Ercc3P49135 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Ercc3P49135 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.58■□□□□ 0.09
Ercc3P49135 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ercc3P49135 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ercc3P49135 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ercc3P49135 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ercc3P49135 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ercc3P49135 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Ercc3P49135 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC15.58■□□□□ 0.08
Ercc3P49135 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Ercc3P49135 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ercc3P49135 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ercc3P49135 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Ercc3P49135 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.58■□□□□ 0.08
Ercc3P49135 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Ercc3P49135 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ercc3P49135 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ercc3P49135 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.58■□□□□ 0.08
Ercc3P49135 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.58■□□□□ 0.08
Ercc3P49135 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ercc3P49135 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ercc3P49135 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ercc3P49135 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ercc3P49135 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Ercc3P49135 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.58■□□□□ 0.08
Ercc3P49135 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ercc3P49135 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ercc3P49135 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ercc3P49135 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ercc3P49135 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.58■□□□□ 0.08
Ercc3P49135 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ercc3P49135 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ercc3P49135 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ercc3P49135 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ercc3P49135 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ercc3P49135 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ercc3P49135 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ercc3P49135 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.57■□□□□ 0.08
Ercc3P49135 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Ercc3P49135 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ercc3P49135 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ercc3P49135 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ercc3P49135 Gm13123-201ENSMUST00000122173 492 ntBASIC15.57■□□□□ 0.08
Ercc3P49135 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.57■□□□□ 0.08
Ercc3P49135 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC15.57■□□□□ 0.08
Ercc3P49135 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Ercc3P49135 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.57■□□□□ 0.08
Ercc3P49135 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.57■□□□□ 0.08
Ercc3P49135 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.57■□□□□ 0.08
Ercc3P49135 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ercc3P49135 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ercc3P49135 Gm25857-201ENSMUST00000082788 129 ntBASIC15.57■□□□□ 0.08
Ercc3P49135 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ercc3P49135 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ercc3P49135 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ercc3P49135 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ercc3P49135 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.57■□□□□ 0.08
Ercc3P49135 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.57■□□□□ 0.08
Ercc3P49135 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ercc3P49135 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms