Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TgfaP48030 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
TgfaP48030 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TgfaP48030 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TgfaP48030 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
TgfaP48030 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TgfaP48030 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.38□□□□□ -0.59
TgfaP48030 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.38□□□□□ -0.59
TgfaP48030 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.38□□□□□ -0.59
TgfaP48030 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
TgfaP48030 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TgfaP48030 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TgfaP48030 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.38□□□□□ -0.59
TgfaP48030 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TgfaP48030 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TgfaP48030 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TgfaP48030 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TgfaP48030 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
TgfaP48030 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.37□□□□□ -0.59
TgfaP48030 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.37□□□□□ -0.59
TgfaP48030 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
TgfaP48030 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
TgfaP48030 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.37□□□□□ -0.59
TgfaP48030 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.37□□□□□ -0.59
TgfaP48030 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
TgfaP48030 Gm11531-201ENSMUST00000117614 555 ntBASIC11.37□□□□□ -0.59
TgfaP48030 Gm15547-201ENSMUST00000122152 333 ntBASIC11.37□□□□□ -0.59
TgfaP48030 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.37□□□□□ -0.59
TgfaP48030 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.37□□□□□ -0.59
TgfaP48030 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.37□□□□□ -0.59
TgfaP48030 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.37□□□□□ -0.59
TgfaP48030 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
TgfaP48030 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.37□□□□□ -0.59
TgfaP48030 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.37□□□□□ -0.59
TgfaP48030 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.37□□□□□ -0.59
TgfaP48030 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.37□□□□□ -0.59
TgfaP48030 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TgfaP48030 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TgfaP48030 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
TgfaP48030 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
TgfaP48030 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TgfaP48030 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TgfaP48030 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
TgfaP48030 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TgfaP48030 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TgfaP48030 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TgfaP48030 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
TgfaP48030 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.36□□□□□ -0.59
TgfaP48030 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TgfaP48030 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
TgfaP48030 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TgfaP48030 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TgfaP48030 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TgfaP48030 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
TgfaP48030 Gm7857-201ENSMUST00000117957 358 ntBASIC11.36□□□□□ -0.59
TgfaP48030 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.36□□□□□ -0.59
TgfaP48030 Gm13461-201ENSMUST00000120980 662 ntBASIC11.36□□□□□ -0.59
TgfaP48030 Gm13570-201ENSMUST00000140763 309 ntBASIC11.36□□□□□ -0.59
TgfaP48030 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.36□□□□□ -0.59
TgfaP48030 Gm26361-201ENSMUST00000158868 186 ntBASIC11.36□□□□□ -0.59
TgfaP48030 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TgfaP48030 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.36□□□□□ -0.59
TgfaP48030 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TgfaP48030 Gm43378-201ENSMUST00000199336 582 ntBASIC11.36□□□□□ -0.59
TgfaP48030 Gm32025-201ENSMUST00000217960 307 ntBASIC11.36□□□□□ -0.59
TgfaP48030 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
TgfaP48030 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms