Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.54□□□□□ -0.24
Msh2P43247 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Msh2P43247 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.54□□□□□ -0.24
Msh2P43247 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Msh2P43247 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.54□□□□□ -0.24
Msh2P43247 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.54□□□□□ -0.24
Msh2P43247 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.54□□□□□ -0.24
Msh2P43247 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.54□□□□□ -0.24
Msh2P43247 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Msh2P43247 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Msh2P43247 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Msh2P43247 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.53□□□□□ -0.24
Msh2P43247 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Msh2P43247 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Msh2P43247 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.53□□□□□ -0.24
Msh2P43247 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Msh2P43247 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Msh2P43247 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Msh2P43247 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Msh2P43247 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Msh2P43247 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Msh2P43247 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Msh2P43247 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Msh2P43247 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Msh2P43247 Gm12859-201ENSMUST00000117834 427 ntBASIC13.53□□□□□ -0.24
Msh2P43247 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Msh2P43247 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Msh2P43247 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Msh2P43247 Gm5279-201ENSMUST00000199575 745 ntBASIC13.53□□□□□ -0.24
Msh2P43247 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Msh2P43247 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Msh2P43247 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Msh2P43247 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Msh2P43247 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.53□□□□□ -0.24
Msh2P43247 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Msh2P43247 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Msh2P43247 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Msh2P43247 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.53□□□□□ -0.24
Msh2P43247 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Msh2P43247 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Msh2P43247 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Msh2P43247 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.53□□□□□ -0.24
Msh2P43247 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Msh2P43247 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Msh2P43247 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Msh2P43247 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Msh2P43247 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Msh2P43247 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Msh2P43247 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Msh2P43247 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.52□□□□□ -0.24
Msh2P43247 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Msh2P43247 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Msh2P43247 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.52□□□□□ -0.24
Msh2P43247 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Msh2P43247 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Msh2P43247 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Msh2P43247 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Msh2P43247 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Msh2P43247 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Msh2P43247 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Msh2P43247 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.52□□□□□ -0.24
Msh2P43247 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Msh2P43247 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.52□□□□□ -0.25
Msh2P43247 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Msh2P43247 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Msh2P43247 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
Msh2P43247 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Msh2P43247 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Msh2P43247 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Msh2P43247 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Msh2P43247 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.52□□□□□ -0.25
Msh2P43247 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Msh2P43247 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Msh2P43247 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.52□□□□□ -0.25
Msh2P43247 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.52□□□□□ -0.25
Msh2P43247 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Msh2P43247 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Msh2P43247 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Msh2P43247 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Msh2P43247 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
Msh2P43247 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms