Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.56□□□□□ -0.4
Tnfsf9P41274 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf9P41274 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.56□□□□□ -0.4
Tnfsf9P41274 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Gm16479-201ENSMUST00000121706 932 ntBASIC12.56□□□□□ -0.4
Tnfsf9P41274 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Gm28693-202ENSMUST00000190758 331 ntBASIC12.56□□□□□ -0.4
Tnfsf9P41274 Gm19184-201ENSMUST00000196798 928 ntBASIC12.56□□□□□ -0.4
Tnfsf9P41274 Gm6013-201ENSMUST00000212264 699 ntBASIC12.56□□□□□ -0.4
Tnfsf9P41274 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.56□□□□□ -0.4
Tnfsf9P41274 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.56□□□□□ -0.4
Tnfsf9P41274 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf9P41274 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.56□□□□□ -0.4
Tnfsf9P41274 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Acot6-202ENSMUST00000222921 3622 ntBASIC12.56□□□□□ -0.4
Tnfsf9P41274 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Tnfsf9P41274 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Tnfsf9P41274 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Gm11637-201ENSMUST00000120601 592 ntBASIC12.55□□□□□ -0.4
Tnfsf9P41274 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Gm7029-201ENSMUST00000173226 450 ntBASIC12.55□□□□□ -0.4
Tnfsf9P41274 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Gm45331-201ENSMUST00000209868 554 ntBASIC12.55□□□□□ -0.4
Tnfsf9P41274 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf9P41274 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.55□□□□□ -0.4
Tnfsf9P41274 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf9P41274 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf9P41274 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.54□□□□□ -0.4
Tnfsf9P41274 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms