Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl12P40224 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl12P40224 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl12P40224 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl12P40224 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cxcl12P40224 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl12P40224 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl12P40224 Gm15432-201ENSMUST00000121106 195 ntBASIC13.43□□□□□ -0.26
Cxcl12P40224 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Cxcl12P40224 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.43□□□□□ -0.26
Cxcl12P40224 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl12P40224 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.43□□□□□ -0.26
Cxcl12P40224 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl12P40224 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cxcl12P40224 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl12P40224 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl12P40224 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl12P40224 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.43□□□□□ -0.26
Cxcl12P40224 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl12P40224 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl12P40224 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl12P40224 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl12P40224 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl12P40224 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.43□□□□□ -0.26
Cxcl12P40224 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl12P40224 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl12P40224 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl12P40224 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl12P40224 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl12P40224 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.42□□□□□ -0.26
Cxcl12P40224 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Cxcl12P40224 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl12P40224 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl12P40224 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Cxcl12P40224 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl12P40224 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl12P40224 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cxcl12P40224 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl12P40224 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl12P40224 Gm6963-201ENSMUST00000147879 379 ntBASIC13.42□□□□□ -0.26
Cxcl12P40224 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.42□□□□□ -0.26
Cxcl12P40224 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl12P40224 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl12P40224 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.42□□□□□ -0.26
Cxcl12P40224 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.42□□□□□ -0.26
Cxcl12P40224 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Cxcl12P40224 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl12P40224 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.42□□□□□ -0.26
Cxcl12P40224 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl12P40224 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl12P40224 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl12P40224 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cxcl12P40224 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl12P40224 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.42□□□□□ -0.26
Cxcl12P40224 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl12P40224 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl12P40224 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl12P40224 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl12P40224 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl12P40224 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cxcl12P40224 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl12P40224 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl12P40224 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl12P40224 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cxcl12P40224 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl12P40224 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl12P40224 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl12P40224 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl12P40224 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.41□□□□□ -0.26
Cxcl12P40224 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl12P40224 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl12P40224 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl12P40224 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl12P40224 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl12P40224 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl12P40224 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Cxcl12P40224 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.41□□□□□ -0.26
Cxcl12P40224 Selenot-ps-201ENSMUST00000119098 593 ntBASIC13.41□□□□□ -0.26
Cxcl12P40224 Gm13888-201ENSMUST00000119148 422 ntBASIC13.41□□□□□ -0.26
Cxcl12P40224 Gm13736-201ENSMUST00000119272 253 ntBASIC13.41□□□□□ -0.26
Cxcl12P40224 Gm11667-201ENSMUST00000119828 486 ntBASIC13.41□□□□□ -0.26
Cxcl12P40224 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.41□□□□□ -0.26
Cxcl12P40224 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.41□□□□□ -0.26
Cxcl12P40224 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.41□□□□□ -0.26
Cxcl12P40224 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl12P40224 Gm29615-201ENSMUST00000185371 697 ntBASIC13.41□□□□□ -0.26
Cxcl12P40224 Gm28224-201ENSMUST00000186078 697 ntBASIC13.41□□□□□ -0.26
Cxcl12P40224 Gm29001-201ENSMUST00000186177 697 ntBASIC13.41□□□□□ -0.26
Cxcl12P40224 Gm28292-201ENSMUST00000186593 697 ntBASIC13.41□□□□□ -0.26
Cxcl12P40224 Gm28101-201ENSMUST00000187608 697 ntBASIC13.41□□□□□ -0.26
Cxcl12P40224 Gm29076-201ENSMUST00000187689 697 ntBASIC13.41□□□□□ -0.26
Cxcl12P40224 Gm28302-201ENSMUST00000187931 697 ntBASIC13.41□□□□□ -0.26
Cxcl12P40224 Gm28646-201ENSMUST00000188220 697 ntBASIC13.41□□□□□ -0.26
Cxcl12P40224 Gm28205-201ENSMUST00000189177 697 ntBASIC13.41□□□□□ -0.26
Cxcl12P40224 Gm29032-201ENSMUST00000189797 697 ntBASIC13.41□□□□□ -0.26
Cxcl12P40224 Gm28695-201ENSMUST00000190300 697 ntBASIC13.41□□□□□ -0.26
Cxcl12P40224 Gm37448-201ENSMUST00000192795 697 ntBASIC13.41□□□□□ -0.26
Cxcl12P40224 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.41□□□□□ -0.26
Cxcl12P40224 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.41□□□□□ -0.26
Cxcl12P40224 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms