Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.93□□□□□ -0.34
HmgclP38060 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
HmgclP38060 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.93□□□□□ -0.34
HmgclP38060 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
HmgclP38060 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.93□□□□□ -0.34
HmgclP38060 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.93□□□□□ -0.34
HmgclP38060 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
HmgclP38060 Gm24196-201ENSMUST00000179161 110 ntBASIC12.93□□□□□ -0.34
HmgclP38060 Gm8652-201ENSMUST00000181363 964 ntBASIC12.93□□□□□ -0.34
HmgclP38060 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.93□□□□□ -0.34
HmgclP38060 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.93□□□□□ -0.34
HmgclP38060 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.93□□□□□ -0.34
HmgclP38060 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.93□□□□□ -0.34
HmgclP38060 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.93□□□□□ -0.34
HmgclP38060 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
HmgclP38060 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
HmgclP38060 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
HmgclP38060 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
HmgclP38060 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
HmgclP38060 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.93□□□□□ -0.34
HmgclP38060 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
HmgclP38060 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
HmgclP38060 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HmgclP38060 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HmgclP38060 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HmgclP38060 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HmgclP38060 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
HmgclP38060 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HmgclP38060 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
HmgclP38060 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HmgclP38060 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HmgclP38060 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
HmgclP38060 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
HmgclP38060 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HmgclP38060 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HmgclP38060 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HmgclP38060 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
HmgclP38060 Mir686-201ENSMUST00000102174 109 ntBASIC12.92□□□□□ -0.34
HmgclP38060 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.92□□□□□ -0.34
HmgclP38060 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HmgclP38060 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HmgclP38060 Gm8810-201ENSMUST00000172895 754 ntBASIC12.92□□□□□ -0.34
HmgclP38060 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
HmgclP38060 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HmgclP38060 Gm28693-202ENSMUST00000190758 331 ntBASIC12.92□□□□□ -0.34
HmgclP38060 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.92□□□□□ -0.34
HmgclP38060 Gm6458-201ENSMUST00000211573 635 ntBASIC12.92□□□□□ -0.34
HmgclP38060 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.92□□□□□ -0.34
HmgclP38060 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
HmgclP38060 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HmgclP38060 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HmgclP38060 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HmgclP38060 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HmgclP38060 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.92□□□□□ -0.34
HmgclP38060 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HmgclP38060 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.92□□□□□ -0.34
HmgclP38060 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HmgclP38060 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
HmgclP38060 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.91□□□□□ -0.34
HmgclP38060 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.91□□□□□ -0.34
HmgclP38060 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.91□□□□□ -0.34
HmgclP38060 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms