Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Sftpa1P35242 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.1□□□□□ -0.47
Sftpa1P35242 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.1□□□□□ -0.47
Sftpa1P35242 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sftpa1P35242 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Sftpa1P35242 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.09□□□□□ -0.47
Sftpa1P35242 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.09□□□□□ -0.47
Sftpa1P35242 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.09□□□□□ -0.47
Sftpa1P35242 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sftpa1P35242 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sftpa1P35242 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Gm13875-201ENSMUST00000120162 282 ntBASIC12.09□□□□□ -0.47
Sftpa1P35242 Gm11978-201ENSMUST00000122315 466 ntBASIC12.09□□□□□ -0.47
Sftpa1P35242 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.09□□□□□ -0.47
Sftpa1P35242 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.09□□□□□ -0.47
Sftpa1P35242 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sftpa1P35242 Gm27023-201ENSMUST00000182372 285 ntBASIC12.09□□□□□ -0.47
Sftpa1P35242 Gm28450-201ENSMUST00000187349 638 ntBASIC12.09□□□□□ -0.47
Sftpa1P35242 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.09□□□□□ -0.47
Sftpa1P35242 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Gm8959-201ENSMUST00000213150 571 ntBASIC12.09□□□□□ -0.47
Sftpa1P35242 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.09□□□□□ -0.47
Sftpa1P35242 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Sftpa1P35242 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sftpa1P35242 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.09□□□□□ -0.47
Sftpa1P35242 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
Sftpa1P35242 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.09□□□□□ -0.47
Sftpa1P35242 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sftpa1P35242 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sftpa1P35242 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Sftpa1P35242 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Sftpa1P35242 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sftpa1P35242 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Sftpa1P35242 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Sftpa1P35242 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sftpa1P35242 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.08□□□□□ -0.48
Sftpa1P35242 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Sftpa1P35242 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Gm11930-201ENSMUST00000117788 190 ntBASIC12.08□□□□□ -0.48
Sftpa1P35242 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.08□□□□□ -0.48
Sftpa1P35242 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.08□□□□□ -0.48
Sftpa1P35242 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Sftpa1P35242 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.08□□□□□ -0.48
Sftpa1P35242 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Sftpa1P35242 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.08□□□□□ -0.48
Sftpa1P35242 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms