Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp13P33435 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.44□□□□□ -0.26
Mmp13P33435 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp13P33435 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp13P33435 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp13P33435 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp13P33435 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp13P33435 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
Mmp13P33435 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.44□□□□□ -0.26
Mmp13P33435 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.44□□□□□ -0.26
Mmp13P33435 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.44□□□□□ -0.26
Mmp13P33435 Gm5745-201ENSMUST00000183748 313 ntBASIC13.44□□□□□ -0.26
Mmp13P33435 Gm27772-201ENSMUST00000184900 187 ntBASIC13.44□□□□□ -0.26
Mmp13P33435 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp13P33435 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.44□□□□□ -0.26
Mmp13P33435 Gm45668-201ENSMUST00000211271 493 ntBASIC13.44□□□□□ -0.26
Mmp13P33435 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp13P33435 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Mmp13P33435 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp13P33435 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp13P33435 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp13P33435 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp13P33435 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp13P33435 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp13P33435 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp13P33435 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp13P33435 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp13P33435 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp13P33435 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.44□□□□□ -0.26
Mmp13P33435 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp13P33435 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.43□□□□□ -0.26
Mmp13P33435 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.43□□□□□ -0.26
Mmp13P33435 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Mmp13P33435 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.43□□□□□ -0.26
Mmp13P33435 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
Mmp13P33435 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Gm6180-201ENSMUST00000065243 498 ntBASIC13.43□□□□□ -0.26
Mmp13P33435 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.43□□□□□ -0.26
Mmp13P33435 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Mmp13P33435 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.43□□□□□ -0.26
Mmp13P33435 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.43□□□□□ -0.26
Mmp13P33435 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Mmp13P33435 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp13P33435 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.42□□□□□ -0.26
Mmp13P33435 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp13P33435 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp13P33435 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Mmp13P33435 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp13P33435 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Mmp13P33435 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.42□□□□□ -0.26
Mmp13P33435 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp13P33435 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp13P33435 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.42□□□□□ -0.26
Mmp13P33435 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp13P33435 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.42□□□□□ -0.26
Mmp13P33435 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp13P33435 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp13P33435 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp13P33435 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Mmp13P33435 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.42□□□□□ -0.26
Mmp13P33435 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp13P33435 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.42□□□□□ -0.26
Mmp13P33435 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.42□□□□□ -0.26
Mmp13P33435 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.42□□□□□ -0.26
Mmp13P33435 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.42□□□□□ -0.26
Mmp13P33435 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp13P33435 Gm12403-201ENSMUST00000121384 959 ntBASIC13.42□□□□□ -0.26
Mmp13P33435 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.42□□□□□ -0.26
Mmp13P33435 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.42□□□□□ -0.26
Mmp13P33435 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.42□□□□□ -0.26
Mmp13P33435 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.42□□□□□ -0.26
Mmp13P33435 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms