Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40P27512 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.87□□□□□ -0.51
Cd40P27512 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.87□□□□□ -0.51
Cd40P27512 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40P27512 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40P27512 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40P27512 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40P27512 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40P27512 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40P27512 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.87□□□□□ -0.51
Cd40P27512 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40P27512 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40P27512 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40P27512 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40P27512 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Cd40P27512 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40P27512 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.87□□□□□ -0.51
Cd40P27512 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40P27512 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40P27512 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.86□□□□□ -0.51
Cd40P27512 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.86□□□□□ -0.51
Cd40P27512 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.86□□□□□ -0.51
Cd40P27512 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cd40P27512 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Mir686-201ENSMUST00000102174 109 ntBASIC11.86□□□□□ -0.51
Cd40P27512 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Gm22331-201ENSMUST00000158066 136 ntBASIC11.86□□□□□ -0.51
Cd40P27512 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
Cd40P27512 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.86□□□□□ -0.51
Cd40P27512 Gm37497-201ENSMUST00000195830 798 ntBASIC11.86□□□□□ -0.51
Cd40P27512 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.86□□□□□ -0.51
Cd40P27512 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.86□□□□□ -0.51
Cd40P27512 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cd40P27512 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40P27512 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Cd40P27512 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cd40P27512 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.85□□□□□ -0.51
Cd40P27512 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.85□□□□□ -0.51
Cd40P27512 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.85□□□□□ -0.51
Cd40P27512 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.85□□□□□ -0.51
Cd40P27512 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.85□□□□□ -0.51
Cd40P27512 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Cd40P27512 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.85□□□□□ -0.51
Cd40P27512 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.85□□□□□ -0.51
Cd40P27512 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.85□□□□□ -0.51
Cd40P27512 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.85□□□□□ -0.51
Cd40P27512 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.85□□□□□ -0.51
Cd40P27512 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.85□□□□□ -0.51
Cd40P27512 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Cd40P27512 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.85□□□□□ -0.51
Cd40P27512 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms