Protein–RNA interactions for Protein: P25233

Ndn, Necdin, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NdnP25233 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NdnP25233 Gm13294-201ENSMUST00000121757 1330 ntBASIC10.53□□□□□ -0.72
NdnP25233 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
NdnP25233 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NdnP25233 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NdnP25233 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.53□□□□□ -0.72
NdnP25233 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NdnP25233 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
NdnP25233 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
NdnP25233 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
NdnP25233 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
NdnP25233 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.52□□□□□ -0.72
NdnP25233 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
NdnP25233 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
NdnP25233 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
NdnP25233 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC10.52□□□□□ -0.73
NdnP25233 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
NdnP25233 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.52□□□□□ -0.73
NdnP25233 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
NdnP25233 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Gm9347-201ENSMUST00000211473 1607 ntBASIC10.52□□□□□ -0.73
NdnP25233 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
NdnP25233 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.52□□□□□ -0.73
NdnP25233 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
NdnP25233 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.52□□□□□ -0.73
NdnP25233 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.52□□□□□ -0.73
NdnP25233 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
NdnP25233 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
NdnP25233 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC10.52□□□□□ -0.73
NdnP25233 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC10.52□□□□□ -0.73
NdnP25233 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC10.52□□□□□ -0.73
NdnP25233 Mir5126-201ENSMUST00000175513 77 ntBASIC10.52□□□□□ -0.73
NdnP25233 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC10.52□□□□□ -0.73
NdnP25233 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC10.52□□□□□ -0.73
NdnP25233 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Gm8597-201ENSMUST00000191525 1109 ntBASIC10.52□□□□□ -0.73
NdnP25233 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC10.52□□□□□ -0.73
NdnP25233 AC131690.1-201ENSMUST00000218406 374 ntBASIC10.52□□□□□ -0.73
NdnP25233 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC10.52□□□□□ -0.73
NdnP25233 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
NdnP25233 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.52□□□□□ -0.73
NdnP25233 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
NdnP25233 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 AC025913.2-201ENSMUST00000220136 1766 ntBASIC10.52□□□□□ -0.73
NdnP25233 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
NdnP25233 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NdnP25233 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.51□□□□□ -0.73
NdnP25233 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NdnP25233 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NdnP25233 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NdnP25233 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NdnP25233 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NdnP25233 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NdnP25233 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NdnP25233 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
NdnP25233 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NdnP25233 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NdnP25233 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NdnP25233 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.51□□□□□ -0.73
NdnP25233 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NdnP25233 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.51□□□□□ -0.73
NdnP25233 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NdnP25233 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NdnP25233 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
NdnP25233 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
NdnP25233 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
NdnP25233 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NdnP25233 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC10.51□□□□□ -0.73
NdnP25233 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NdnP25233 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NdnP25233 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NdnP25233 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
NdnP25233 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NdnP25233 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC10.51□□□□□ -0.73
NdnP25233 AC084391.1-201ENSMUST00000200651 141 ntBASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms