Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6bP23440 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6bP23440 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pde6bP23440 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6bP23440 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6bP23440 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6bP23440 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.35□□□□□ -0.11
Pde6bP23440 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6bP23440 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6bP23440 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6bP23440 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6bP23440 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.35□□□□□ -0.11
Pde6bP23440 Gm16202-201ENSMUST00000117532 544 ntBASIC14.35□□□□□ -0.11
Pde6bP23440 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.35□□□□□ -0.11
Pde6bP23440 Gm2231-201ENSMUST00000125661 612 ntBASIC14.35□□□□□ -0.11
Pde6bP23440 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6bP23440 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pde6bP23440 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.35□□□□□ -0.11
Pde6bP23440 Gm7029-201ENSMUST00000173226 450 ntBASIC14.35□□□□□ -0.11
Pde6bP23440 Mir8109-201ENSMUST00000184375 117 ntBASIC14.35□□□□□ -0.11
Pde6bP23440 Gm43133-201ENSMUST00000197472 463 ntBASIC14.35□□□□□ -0.11
Pde6bP23440 Gm44364-201ENSMUST00000198368 141 ntBASIC14.35□□□□□ -0.11
Pde6bP23440 Gm45930-201ENSMUST00000221330 292 ntBASIC14.35□□□□□ -0.11
Pde6bP23440 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.35□□□□□ -0.11
Pde6bP23440 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pde6bP23440 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6bP23440 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.35□□□□□ -0.11
Pde6bP23440 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6bP23440 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6bP23440 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.35□□□□□ -0.11
Pde6bP23440 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pde6bP23440 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pde6bP23440 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6bP23440 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6bP23440 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6bP23440 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6bP23440 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Pde6bP23440 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.34□□□□□ -0.11
Pde6bP23440 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6bP23440 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6bP23440 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6bP23440 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6bP23440 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6bP23440 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6bP23440 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.34□□□□□ -0.11
Pde6bP23440 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6bP23440 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6bP23440 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6bP23440 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6bP23440 Gm13123-201ENSMUST00000122173 492 ntBASIC14.34□□□□□ -0.11
Pde6bP23440 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6bP23440 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
Pde6bP23440 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.34□□□□□ -0.11
Pde6bP23440 Gm16379-201ENSMUST00000161469 348 ntBASIC14.34□□□□□ -0.11
Pde6bP23440 Gm8762-201ENSMUST00000193486 339 ntBASIC14.34□□□□□ -0.11
Pde6bP23440 Gm44069-201ENSMUST00000204898 506 ntBASIC14.34□□□□□ -0.11
Pde6bP23440 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.34□□□□□ -0.11
Pde6bP23440 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6bP23440 Gm18935-201ENSMUST00000212692 664 ntBASIC14.34□□□□□ -0.11
Pde6bP23440 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.34□□□□□ -0.11
Pde6bP23440 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6bP23440 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pde6bP23440 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6bP23440 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6bP23440 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6bP23440 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.34□□□□□ -0.11
Pde6bP23440 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6bP23440 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.34□□□□□ -0.11
Pde6bP23440 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6bP23440 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6bP23440 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6bP23440 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.34□□□□□ -0.11
Pde6bP23440 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6bP23440 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6bP23440 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6bP23440 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6bP23440 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6bP23440 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pde6bP23440 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pde6bP23440 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.33□□□□□ -0.11
Pde6bP23440 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pde6bP23440 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pde6bP23440 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Pde6bP23440 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
Pde6bP23440 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Pde6bP23440 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
Pde6bP23440 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6bP23440 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.33□□□□□ -0.12
Pde6bP23440 Gm25261-201ENSMUST00000157416 134 ntBASIC14.33□□□□□ -0.12
Pde6bP23440 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.33□□□□□ -0.12
Pde6bP23440 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pde6bP23440 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6bP23440 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.33□□□□□ -0.12
Pde6bP23440 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6bP23440 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6bP23440 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6bP23440 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6bP23440 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6bP23440 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6bP23440 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms