Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Gm38671-201ENSMUST00000200573 130 ntBASIC14.3□□□□□ -0.12
Chmp6P0C0A3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp6P0C0A3 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Gm27892-201ENSMUST00000185017 106 ntBASIC14.29□□□□□ -0.12
Chmp6P0C0A3 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp6P0C0A3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp6P0C0A3 Gm6244-201ENSMUST00000178732 841 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms