Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxb3P09026 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxb3P09026 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Hoxb3P09026 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxb3P09026 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.11□□□□□ -0.31
Hoxb3P09026 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxb3P09026 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Hoxb3P09026 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxb3P09026 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxb3P09026 Gm11618-201ENSMUST00000117946 267 ntBASIC13.11□□□□□ -0.31
Hoxb3P09026 Gm6447-201ENSMUST00000118905 835 ntBASIC13.11□□□□□ -0.31
Hoxb3P09026 Gm14208-201ENSMUST00000119645 678 ntBASIC13.11□□□□□ -0.31
Hoxb3P09026 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxb3P09026 Gm8502-201ENSMUST00000185708 901 ntBASIC13.11□□□□□ -0.31
Hoxb3P09026 Gm8510-201ENSMUST00000189202 895 ntBASIC13.11□□□□□ -0.31
Hoxb3P09026 Gm2316-201ENSMUST00000190613 921 ntBASIC13.11□□□□□ -0.31
Hoxb3P09026 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.11□□□□□ -0.31
Hoxb3P09026 AC172027.1-201ENSMUST00000217659 337 ntBASIC13.11□□□□□ -0.31
Hoxb3P09026 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC13.11□□□□□ -0.31
Hoxb3P09026 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.11□□□□□ -0.31
Hoxb3P09026 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxb3P09026 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Hoxb3P09026 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxb3P09026 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxb3P09026 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxb3P09026 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxb3P09026 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxb3P09026 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxb3P09026 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Hoxb3P09026 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxb3P09026 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxb3P09026 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxb3P09026 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Hoxb3P09026 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.11□□□□□ -0.31
Hoxb3P09026 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxb3P09026 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxb3P09026 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxb3P09026 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxb3P09026 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxb3P09026 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.1□□□□□ -0.31
Hoxb3P09026 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.1□□□□□ -0.31
Hoxb3P09026 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Hoxb3P09026 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Hoxb3P09026 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.1□□□□□ -0.31
Hoxb3P09026 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.1□□□□□ -0.31
Hoxb3P09026 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Hoxb3P09026 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 Gm6630-201ENSMUST00000119199 454 ntBASIC13.1□□□□□ -0.31
Hoxb3P09026 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.1□□□□□ -0.31
Hoxb3P09026 Gm5970-201ENSMUST00000131638 1216 ntBASIC13.1□□□□□ -0.31
Hoxb3P09026 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC13.1□□□□□ -0.31
Hoxb3P09026 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.1□□□□□ -0.31
Hoxb3P09026 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Hoxb3P09026 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Hoxb3P09026 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.1□□□□□ -0.31
Hoxb3P09026 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Hoxb3P09026 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.1□□□□□ -0.31
Hoxb3P09026 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 Gm10146-201ENSMUST00000072739 309 ntBASIC13.1□□□□□ -0.31
Hoxb3P09026 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Hoxb3P09026 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.1□□□□□ -0.31
Hoxb3P09026 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.1□□□□□ -0.31
Hoxb3P09026 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.1□□□□□ -0.31
Hoxb3P09026 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Hoxb3P09026 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxb3P09026 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Hoxb3P09026 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxb3P09026 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.09□□□□□ -0.31
Hoxb3P09026 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxb3P09026 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxb3P09026 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Hoxb3P09026 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxb3P09026 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxb3P09026 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.09□□□□□ -0.31
Hoxb3P09026 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Hoxb3P09026 Gm13123-201ENSMUST00000122173 492 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms