Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.87□□□□□ -0.19
Hoxc8P09025 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc8P09025 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc8P09025 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc8P09025 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc8P09025 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc8P09025 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc8P09025 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc8P09025 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc8P09025 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc8P09025 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc8P09025 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc8P09025 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Hoxc8P09025 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc8P09025 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc8P09025 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc8P09025 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc8P09025 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc8P09025 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc8P09025 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc8P09025 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc8P09025 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc8P09025 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc8P09025 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc8P09025 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc8P09025 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Hoxc8P09025 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Hoxc8P09025 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Hoxc8P09025 Gm12217-201ENSMUST00000118858 696 ntBASIC13.86□□□□□ -0.19
Hoxc8P09025 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc8P09025 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.86□□□□□ -0.19
Hoxc8P09025 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc8P09025 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc8P09025 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Hoxc8P09025 Mir3547-201ENSMUST00000175461 88 ntBASIC13.86□□□□□ -0.19
Hoxc8P09025 Gm43138-201ENSMUST00000199123 708 ntBASIC13.86□□□□□ -0.19
Hoxc8P09025 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc8P09025 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.86□□□□□ -0.19
Hoxc8P09025 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc8P09025 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.86□□□□□ -0.19
Hoxc8P09025 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.86□□□□□ -0.19
Hoxc8P09025 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.86□□□□□ -0.19
Hoxc8P09025 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc8P09025 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc8P09025 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.86□□□□□ -0.19
Hoxc8P09025 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Hoxc8P09025 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc8P09025 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc8P09025 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.86□□□□□ -0.19
Hoxc8P09025 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc8P09025 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc8P09025 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc8P09025 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc8P09025 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Hoxc8P09025 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Hoxc8P09025 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.85□□□□□ -0.19
Hoxc8P09025 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.85□□□□□ -0.19
Hoxc8P09025 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc8P09025 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc8P09025 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Hoxc8P09025 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc8P09025 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc8P09025 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc8P09025 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Hoxc8P09025 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.85□□□□□ -0.19
Hoxc8P09025 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc8P09025 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc8P09025 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Hoxc8P09025 Gm12015-201ENSMUST00000117065 843 ntBASIC13.85□□□□□ -0.19
Hoxc8P09025 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc8P09025 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc8P09025 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc8P09025 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.85□□□□□ -0.19
Hoxc8P09025 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.85□□□□□ -0.19
Hoxc8P09025 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.85□□□□□ -0.19
Hoxc8P09025 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc8P09025 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc8P09025 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc8P09025 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Hoxc8P09025 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc8P09025 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.85□□□□□ -0.19
Hoxc8P09025 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Hoxc8P09025 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc8P09025 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc8P09025 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc8P09025 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Hoxc8P09025 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc8P09025 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc8P09025 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc8P09025 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc8P09025 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc8P09025 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc8P09025 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Hoxc8P09025 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc8P09025 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Hoxc8P09025 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc8P09025 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Hoxc8P09025 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc8P09025 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc8P09025 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms