Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Gm14921-201ENSMUST00000118643 908 ntBASIC12.91□□□□□ -0.34
Hoxa4P06798 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Hoxa4P06798 Gm27514-201ENSMUST00000183692 110 ntBASIC12.91□□□□□ -0.34
Hoxa4P06798 Mir7085-201ENSMUST00000184353 66 ntBASIC12.91□□□□□ -0.34
Hoxa4P06798 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Hoxa4P06798 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.91□□□□□ -0.34
Hoxa4P06798 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.91□□□□□ -0.34
Hoxa4P06798 Gm8099-201ENSMUST00000200510 742 ntBASIC12.91□□□□□ -0.34
Hoxa4P06798 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Hoxa4P06798 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.91□□□□□ -0.34
Hoxa4P06798 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
Hoxa4P06798 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa4P06798 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa4P06798 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa4P06798 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa4P06798 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa4P06798 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa4P06798 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa4P06798 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa4P06798 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa4P06798 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa4P06798 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa4P06798 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa4P06798 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa4P06798 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa4P06798 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa4P06798 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.9□□□□□ -0.34
Hoxa4P06798 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Hoxa4P06798 Gm14127-201ENSMUST00000117906 678 ntBASIC12.9□□□□□ -0.34
Hoxa4P06798 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.9□□□□□ -0.34
Hoxa4P06798 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa4P06798 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Hoxa4P06798 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.9□□□□□ -0.34
Hoxa4P06798 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa4P06798 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.9□□□□□ -0.34
Hoxa4P06798 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Hoxa4P06798 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Hoxa4P06798 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa4P06798 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.9□□□□□ -0.34
Hoxa4P06798 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.9□□□□□ -0.34
Hoxa4P06798 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.9□□□□□ -0.34
Hoxa4P06798 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Hoxa4P06798 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Hoxa4P06798 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.9□□□□□ -0.34
Hoxa4P06798 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa4P06798 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxa4P06798 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Hoxa4P06798 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.9□□□□□ -0.35
Hoxa4P06798 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.89□□□□□ -0.35
Hoxa4P06798 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.89□□□□□ -0.35
Hoxa4P06798 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Hoxa4P06798 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Hoxa4P06798 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 Snord83b-201ENSMUST00000104546 94 ntBASIC12.89□□□□□ -0.35
Hoxa4P06798 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.89□□□□□ -0.35
Hoxa4P06798 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Hoxa4P06798 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 Gm17208-201ENSMUST00000168388 535 ntBASIC12.89□□□□□ -0.35
Hoxa4P06798 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.89□□□□□ -0.35
Hoxa4P06798 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.89□□□□□ -0.35
Hoxa4P06798 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Hoxa4P06798 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.89□□□□□ -0.35
Hoxa4P06798 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms