Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Gm11764-201ENSMUST00000120221 623 ntBASIC9.2□□□□□ -0.94
Hbb-b1P02088 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Gm7063-201ENSMUST00000186840 981 ntBASIC9.2□□□□□ -0.94
Hbb-b1P02088 Gm29518-201ENSMUST00000190858 372 ntBASIC9.2□□□□□ -0.94
Hbb-b1P02088 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Gm19931-201ENSMUST00000198920 368 ntBASIC9.2□□□□□ -0.94
Hbb-b1P02088 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC9.2□□□□□ -0.94
Hbb-b1P02088 AC166997.1-201ENSMUST00000225122 572 ntBASIC9.2□□□□□ -0.94
Hbb-b1P02088 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC9.2□□□□□ -0.94
Hbb-b1P02088 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hbb-b1P02088 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.2□□□□□ -0.94
Hbb-b1P02088 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC9.19□□□□□ -0.94
Hbb-b1P02088 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Gm15565-201ENSMUST00000118890 427 ntBASIC9.19□□□□□ -0.94
Hbb-b1P02088 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Gm42943-201ENSMUST00000199676 3242 ntBASIC9.19□□□□□ -0.94
Hbb-b1P02088 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 AC154404.1-201ENSMUST00000223601 2077 ntBASIC9.19□□□□□ -0.94
Hbb-b1P02088 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hbb-b1P02088 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC9.18□□□□□ -0.94
Hbb-b1P02088 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Hbb-b1P02088 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hbb-b1P02088 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hbb-b1P02088 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Hbb-b1P02088 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
Hbb-b1P02088 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hbb-b1P02088 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Hbb-b1P02088 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms