Protein–RNA interactions for Protein: P01921

H2-Ab1, H-2 class II histocompatibility antigen, A-D beta chain, mousemouse

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2-Ab1P01921 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Gm3436-201ENSMUST00000179930 840 ntBASIC11.03□□□□□ -0.64
H2-Ab1P01921 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2-Ab1P01921 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
H2-Ab1P01921 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
H2-Ab1P01921 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
H2-Ab1P01921 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
H2-Ab1P01921 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
H2-Ab1P01921 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
H2-Ab1P01921 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.02□□□□□ -0.65
H2-Ab1P01921 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Gm14494-201ENSMUST00000118786 435 ntBASIC11.02□□□□□ -0.65
H2-Ab1P01921 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Gm24158-201ENSMUST00000175263 71 ntBASIC11.02□□□□□ -0.65
H2-Ab1P01921 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.02□□□□□ -0.65
H2-Ab1P01921 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.02□□□□□ -0.65
H2-Ab1P01921 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
H2-Ab1P01921 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.01□□□□□ -0.65
H2-Ab1P01921 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
H2-Ab1P01921 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2-Ab1P01921 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.01□□□□□ -0.65
H2-Ab1P01921 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
H2-Ab1P01921 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2-Ab1P01921 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
H2-Ab1P01921 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2-Ab1P01921 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2-Ab1P01921 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
H2-Ab1P01921 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2-Ab1P01921 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2-Ab1P01921 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2-Ab1P01921 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2-Ab1P01921 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.01□□□□□ -0.65
H2-Ab1P01921 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
H2-Ab1P01921 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.01□□□□□ -0.65
H2-Ab1P01921 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2-Ab1P01921 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC11.01□□□□□ -0.65
H2-Ab1P01921 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.01□□□□□ -0.65
H2-Ab1P01921 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
H2-Ab1P01921 Gm25144-201ENSMUST00000179561 110 ntBASIC11.01□□□□□ -0.65
H2-Ab1P01921 Gm25352-201ENSMUST00000179815 110 ntBASIC11.01□□□□□ -0.65
H2-Ab1P01921 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.01□□□□□ -0.65
H2-Ab1P01921 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.01□□□□□ -0.65
H2-Ab1P01921 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.01□□□□□ -0.65
H2-Ab1P01921 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
H2-Ab1P01921 Gm43474-201ENSMUST00000196415 774 ntBASIC11.01□□□□□ -0.65
H2-Ab1P01921 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
H2-Ab1P01921 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2-Ab1P01921 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms