Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC16.7■□□□□ 0.26
Ubr1O70481 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.7■□□□□ 0.26
Ubr1O70481 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC16.7■□□□□ 0.26
Ubr1O70481 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ubr1O70481 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr1O70481 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr1O70481 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr1O70481 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC16.7■□□□□ 0.26
Ubr1O70481 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ubr1O70481 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr1O70481 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr1O70481 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr1O70481 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Ubr1O70481 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr1O70481 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr1O70481 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr1O70481 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr1O70481 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ubr1O70481 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr1O70481 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr1O70481 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.69■□□□□ 0.26
Ubr1O70481 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr1O70481 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ubr1O70481 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr1O70481 Gm5616-201ENSMUST00000165252 384 ntBASIC16.69■□□□□ 0.26
Ubr1O70481 Gm17040-202ENSMUST00000170597 889 ntBASIC16.69■□□□□ 0.26
Ubr1O70481 Gm8741-201ENSMUST00000174736 384 ntBASIC16.69■□□□□ 0.26
Ubr1O70481 Gm43962-201ENSMUST00000203898 190 ntBASIC16.69■□□□□ 0.26
Ubr1O70481 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ubr1O70481 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr1O70481 Gm18626-201ENSMUST00000221512 1409 ntBASIC16.69■□□□□ 0.26
Ubr1O70481 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.69■□□□□ 0.26
Ubr1O70481 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr1O70481 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr1O70481 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Ubr1O70481 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr1O70481 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr1O70481 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr1O70481 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC16.69■□□□□ 0.26
Ubr1O70481 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr1O70481 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr1O70481 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr1O70481 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Ubr1O70481 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC16.69■□□□□ 0.26
Ubr1O70481 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr1O70481 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC16.69■□□□□ 0.26
Ubr1O70481 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr1O70481 Gm34767-201ENSMUST00000191813 1062 ntBASIC16.69■□□□□ 0.26
Ubr1O70481 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Ubr1O70481 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr1O70481 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.69■□□□□ 0.26
Ubr1O70481 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr1O70481 Gm13812-201ENSMUST00000118061 1347 ntBASIC16.69■□□□□ 0.26
Ubr1O70481 Gm13810-201ENSMUST00000118584 1347 ntBASIC16.69■□□□□ 0.26
Ubr1O70481 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr1O70481 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr1O70481 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr1O70481 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubr1O70481 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubr1O70481 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubr1O70481 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ubr1O70481 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubr1O70481 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubr1O70481 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubr1O70481 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubr1O70481 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Ubr1O70481 Gm13045-201ENSMUST00000119019 712 ntBASIC16.68■□□□□ 0.26
Ubr1O70481 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC16.68■□□□□ 0.26
Ubr1O70481 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ubr1O70481 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubr1O70481 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ubr1O70481 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubr1O70481 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubr1O70481 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubr1O70481 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubr1O70481 Gm43858-201ENSMUST00000199418 1778 ntBASIC16.68■□□□□ 0.26
Ubr1O70481 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubr1O70481 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubr1O70481 Gm44851-201ENSMUST00000205735 2309 ntBASIC16.67■□□□□ 0.26
Ubr1O70481 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubr1O70481 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ubr1O70481 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ubr1O70481 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubr1O70481 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubr1O70481 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC16.67■□□□□ 0.26
Ubr1O70481 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubr1O70481 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubr1O70481 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.67■□□□□ 0.26
Ubr1O70481 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Ubr1O70481 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ubr1O70481 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ubr1O70481 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ubr1O70481 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubr1O70481 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubr1O70481 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ubr1O70481 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Ubr1O70481 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubr1O70481 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC16.67■□□□□ 0.26
Ubr1O70481 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Ubr1O70481 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms