Protein–RNA interactions for Protein: O70237

Gfi1b, Zinc finger protein Gfi-1b, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfi1bO70237 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfi1bO70237 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfi1bO70237 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Gfi1bO70237 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfi1bO70237 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Gfi1bO70237 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfi1bO70237 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfi1bO70237 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Gfi1bO70237 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Gfi1bO70237 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfi1bO70237 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfi1bO70237 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfi1bO70237 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Gfi1bO70237 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gfi1bO70237 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.96□□□□□ -0.65
Gfi1bO70237 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.96□□□□□ -0.65
Gfi1bO70237 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gfi1bO70237 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gfi1bO70237 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Gfi1bO70237 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.96□□□□□ -0.65
Gfi1bO70237 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gfi1bO70237 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gfi1bO70237 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gfi1bO70237 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gfi1bO70237 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gfi1bO70237 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gfi1bO70237 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Gfi1bO70237 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC10.96□□□□□ -0.65
Gfi1bO70237 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gfi1bO70237 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Gfi1bO70237 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gfi1bO70237 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gfi1bO70237 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Gfi1bO70237 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC10.96□□□□□ -0.65
Gfi1bO70237 Gm15957-201ENSMUST00000118893 974 ntBASIC10.96□□□□□ -0.65
Gfi1bO70237 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.96□□□□□ -0.65
Gfi1bO70237 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Gfi1bO70237 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC10.96□□□□□ -0.65
Gfi1bO70237 Gm29741-201ENSMUST00000192667 421 ntBASIC10.96□□□□□ -0.65
Gfi1bO70237 AC090659.2-201ENSMUST00000225378 1186 ntBASIC10.96□□□□□ -0.65
Gfi1bO70237 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gfi1bO70237 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gfi1bO70237 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.66
Gfi1bO70237 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Gfi1bO70237 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Gfi1bO70237 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Gfi1bO70237 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Gfi1bO70237 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Gfi1bO70237 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Gfi1bO70237 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Gfi1bO70237 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Gfi1bO70237 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Gfi1bO70237 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.95□□□□□ -0.66
Gfi1bO70237 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.95□□□□□ -0.66
Gfi1bO70237 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.95□□□□□ -0.66
Gfi1bO70237 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.95□□□□□ -0.66
Gfi1bO70237 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.95□□□□□ -0.66
Gfi1bO70237 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.95□□□□□ -0.66
Gfi1bO70237 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 AA543401-201ENSMUST00000164248 1269 ntBASIC10.95□□□□□ -0.66
Gfi1bO70237 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC10.95□□□□□ -0.66
Gfi1bO70237 Gm25144-201ENSMUST00000179561 110 ntBASIC10.95□□□□□ -0.66
Gfi1bO70237 Gm25352-201ENSMUST00000179815 110 ntBASIC10.95□□□□□ -0.66
Gfi1bO70237 Gm27622-201ENSMUST00000183779 60 ntBASIC10.95□□□□□ -0.66
Gfi1bO70237 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Gfi1bO70237 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Gfi1bO70237 Gm37277-201ENSMUST00000194052 1111 ntBASIC10.95□□□□□ -0.66
Gfi1bO70237 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 Gm45453-201ENSMUST00000211758 853 ntBASIC10.95□□□□□ -0.66
Gfi1bO70237 AC139350.3-201ENSMUST00000226151 420 ntBASIC10.95□□□□□ -0.66
Gfi1bO70237 AC149588.3-201ENSMUST00000227515 150 ntBASIC10.95□□□□□ -0.66
Gfi1bO70237 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Gfi1bO70237 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Gfi1bO70237 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Gfi1bO70237 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Gfi1bO70237 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms