Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Nr1i3O35627 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1i3O35627 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1i3O35627 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1i3O35627 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1i3O35627 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1i3O35627 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1i3O35627 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1i3O35627 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.1□□□□□ -0.15
Nr1i3O35627 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Nr1i3O35627 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1i3O35627 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.1□□□□□ -0.15
Nr1i3O35627 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.1□□□□□ -0.15
Nr1i3O35627 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nr1i3O35627 Gm6218-201ENSMUST00000219812 628 ntBASIC14.1□□□□□ -0.15
Nr1i3O35627 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1i3O35627 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.1□□□□□ -0.15
Nr1i3O35627 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Nr1i3O35627 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1i3O35627 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1i3O35627 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1i3O35627 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1i3O35627 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1i3O35627 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.1□□□□□ -0.15
Nr1i3O35627 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1i3O35627 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1i3O35627 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1i3O35627 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1i3O35627 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1i3O35627 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1i3O35627 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1i3O35627 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nr1i3O35627 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1i3O35627 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1i3O35627 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1i3O35627 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.09□□□□□ -0.15
Nr1i3O35627 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1i3O35627 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nr1i3O35627 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.09□□□□□ -0.15
Nr1i3O35627 Gm14057-201ENSMUST00000120631 482 ntBASIC14.09□□□□□ -0.15
Nr1i3O35627 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1i3O35627 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1i3O35627 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nr1i3O35627 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1i3O35627 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.09□□□□□ -0.15
Nr1i3O35627 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nr1i3O35627 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1i3O35627 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.09□□□□□ -0.15
Nr1i3O35627 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1i3O35627 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1i3O35627 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nr1i3O35627 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nr1i3O35627 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1i3O35627 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1i3O35627 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1i3O35627 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.09□□□□□ -0.15
Nr1i3O35627 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1i3O35627 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1i3O35627 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nr1i3O35627 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1i3O35627 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1i3O35627 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1i3O35627 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1i3O35627 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1i3O35627 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nr1i3O35627 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1i3O35627 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1i3O35627 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nr1i3O35627 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nr1i3O35627 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.08□□□□□ -0.15
Nr1i3O35627 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Nr1i3O35627 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nr1i3O35627 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nr1i3O35627 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
Nr1i3O35627 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1i3O35627 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1i3O35627 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.08□□□□□ -0.16
Nr1i3O35627 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1i3O35627 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1i3O35627 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1i3O35627 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1i3O35627 Mir686-201ENSMUST00000102174 109 ntBASIC14.08□□□□□ -0.16
Nr1i3O35627 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1i3O35627 Gm14350-201ENSMUST00000116642 640 ntBASIC14.08□□□□□ -0.16
Nr1i3O35627 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.08□□□□□ -0.16
Nr1i3O35627 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.08□□□□□ -0.16
Nr1i3O35627 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.08□□□□□ -0.16
Nr1i3O35627 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1i3O35627 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1i3O35627 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1i3O35627 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.08□□□□□ -0.16
Nr1i3O35627 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.08□□□□□ -0.16
Nr1i3O35627 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Nr1i3O35627 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1i3O35627 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1i3O35627 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1i3O35627 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1i3O35627 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.08□□□□□ -0.16
Nr1i3O35627 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.08□□□□□ -0.16
Nr1i3O35627 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms