Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Sh2b3O09039 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Sh2b3O09039 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2b3O09039 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2b3O09039 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.69□□□□□ -0.54
Sh2b3O09039 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2b3O09039 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.69□□□□□ -0.54
Sh2b3O09039 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2b3O09039 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Sh2b3O09039 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Sh2b3O09039 Gm5370-201ENSMUST00000187187 574 ntBASIC11.69□□□□□ -0.54
Sh2b3O09039 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Sh2b3O09039 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.69□□□□□ -0.54
Sh2b3O09039 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.69□□□□□ -0.54
Sh2b3O09039 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.69□□□□□ -0.54
Sh2b3O09039 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2b3O09039 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2b3O09039 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2b3O09039 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2b3O09039 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2b3O09039 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2b3O09039 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2b3O09039 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Sh2b3O09039 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.69□□□□□ -0.54
Sh2b3O09039 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2b3O09039 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2b3O09039 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
Sh2b3O09039 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2b3O09039 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2b3O09039 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2b3O09039 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.69□□□□□ -0.54
Sh2b3O09039 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2b3O09039 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.69□□□□□ -0.54
Sh2b3O09039 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2b3O09039 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.69□□□□□ -0.54
Sh2b3O09039 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2b3O09039 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2b3O09039 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2b3O09039 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2b3O09039 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh2b3O09039 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sh2b3O09039 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2b3O09039 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2b3O09039 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2b3O09039 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2b3O09039 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2b3O09039 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2b3O09039 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sh2b3O09039 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2b3O09039 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2b3O09039 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2b3O09039 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.68□□□□□ -0.54
Sh2b3O09039 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.68□□□□□ -0.54
Sh2b3O09039 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2b3O09039 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2b3O09039 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2b3O09039 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2b3O09039 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.68□□□□□ -0.54
Sh2b3O09039 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2b3O09039 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sh2b3O09039 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.68□□□□□ -0.54
Sh2b3O09039 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Sh2b3O09039 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.68□□□□□ -0.54
Sh2b3O09039 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sh2b3O09039 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2b3O09039 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2b3O09039 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.68□□□□□ -0.54
Sh2b3O09039 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Sh2b3O09039 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.68□□□□□ -0.54
Sh2b3O09039 Gm27572-201ENSMUST00000183702 255 ntBASIC11.68□□□□□ -0.54
Sh2b3O09039 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.68□□□□□ -0.54
Sh2b3O09039 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2b3O09039 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.68□□□□□ -0.54
Sh2b3O09039 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2b3O09039 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2b3O09039 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2b3O09039 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2b3O09039 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2b3O09039 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2b3O09039 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sh2b3O09039 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2b3O09039 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2b3O09039 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.68□□□□□ -0.54
Sh2b3O09039 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
Sh2b3O09039 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Sh2b3O09039 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.68□□□□□ -0.54
Sh2b3O09039 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh2b3O09039 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.68□□□□□ -0.54
Sh2b3O09039 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sh2b3O09039 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.67□□□□□ -0.54
Sh2b3O09039 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2b3O09039 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2b3O09039 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2b3O09039 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2b3O09039 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Sh2b3O09039 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.67□□□□□ -0.54
Sh2b3O09039 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.67□□□□□ -0.54
Sh2b3O09039 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2b3O09039 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2b3O09039 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms