Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ebf3O08791 Snora73a-201ENSMUST00000082453 205 ntBASIC13.66□□□□□ -0.22
Ebf3O08791 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf3O08791 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf3O08791 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf3O08791 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.66□□□□□ -0.22
Ebf3O08791 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf3O08791 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Ebf3O08791 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf3O08791 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf3O08791 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ebf3O08791 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf3O08791 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf3O08791 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.65□□□□□ -0.22
Ebf3O08791 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf3O08791 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf3O08791 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf3O08791 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.65□□□□□ -0.22
Ebf3O08791 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.65□□□□□ -0.22
Ebf3O08791 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ebf3O08791 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf3O08791 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf3O08791 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf3O08791 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf3O08791 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf3O08791 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf3O08791 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf3O08791 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf3O08791 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf3O08791 Gm14350-201ENSMUST00000116642 640 ntBASIC13.65□□□□□ -0.22
Ebf3O08791 Gm13350-201ENSMUST00000120519 479 ntBASIC13.65□□□□□ -0.22
Ebf3O08791 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Ebf3O08791 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.65□□□□□ -0.22
Ebf3O08791 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.65□□□□□ -0.22
Ebf3O08791 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ebf3O08791 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.65□□□□□ -0.22
Ebf3O08791 Gm7029-201ENSMUST00000173226 450 ntBASIC13.65□□□□□ -0.22
Ebf3O08791 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.65□□□□□ -0.22
Ebf3O08791 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf3O08791 Gm43133-201ENSMUST00000197472 463 ntBASIC13.65□□□□□ -0.22
Ebf3O08791 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.65□□□□□ -0.22
Ebf3O08791 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.65□□□□□ -0.22
Ebf3O08791 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.65□□□□□ -0.22
Ebf3O08791 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ebf3O08791 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf3O08791 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ebf3O08791 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf3O08791 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf3O08791 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf3O08791 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.65□□□□□ -0.22
Ebf3O08791 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf3O08791 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf3O08791 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ebf3O08791 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf3O08791 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ebf3O08791 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf3O08791 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Ebf3O08791 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf3O08791 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf3O08791 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf3O08791 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf3O08791 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf3O08791 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf3O08791 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf3O08791 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ebf3O08791 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf3O08791 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf3O08791 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.64□□□□□ -0.23
Ebf3O08791 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
Ebf3O08791 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.64□□□□□ -0.23
Ebf3O08791 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf3O08791 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf3O08791 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.64□□□□□ -0.23
Ebf3O08791 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
Ebf3O08791 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.64□□□□□ -0.23
Ebf3O08791 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ebf3O08791 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.64□□□□□ -0.23
Ebf3O08791 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.64□□□□□ -0.23
Ebf3O08791 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.64□□□□□ -0.23
Ebf3O08791 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf3O08791 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf3O08791 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ebf3O08791 Gm24526-201ENSMUST00000082921 158 ntBASIC13.64□□□□□ -0.23
Ebf3O08791 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.64□□□□□ -0.23
Ebf3O08791 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.64□□□□□ -0.23
Ebf3O08791 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf3O08791 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf3O08791 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf3O08791 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf3O08791 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf3O08791 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf3O08791 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf3O08791 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ebf3O08791 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.64□□□□□ -0.23
Ebf3O08791 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf3O08791 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf3O08791 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf3O08791 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.64□□□□□ -0.23
Ebf3O08791 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf3O08791 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms