Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.07□□□□□ -0.32
Gm3139J3QK78 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.07□□□□□ -0.32
Gm3139J3QK78 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.07□□□□□ -0.32
Gm3139J3QK78 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm3139J3QK78 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm3139J3QK78 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.07□□□□□ -0.32
Gm3139J3QK78 Gm5187-201ENSMUST00000117317 991 ntBASIC13.07□□□□□ -0.32
Gm3139J3QK78 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Gm3139J3QK78 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Gm3139J3QK78 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Gm3139J3QK78 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm3139J3QK78 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.07□□□□□ -0.32
Gm3139J3QK78 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.07□□□□□ -0.32
Gm3139J3QK78 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.07□□□□□ -0.32
Gm3139J3QK78 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm3139J3QK78 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm3139J3QK78 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm3139J3QK78 Gm9899-201ENSMUST00000065519 555 ntBASIC13.07□□□□□ -0.32
Gm3139J3QK78 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Gm3139J3QK78 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Gm3139J3QK78 Snora73a-201ENSMUST00000082453 205 ntBASIC13.07□□□□□ -0.32
Gm3139J3QK78 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.07□□□□□ -0.32
Gm3139J3QK78 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Gm3139J3QK78 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm3139J3QK78 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Gm3139J3QK78 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm3139J3QK78 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.07□□□□□ -0.32
Gm3139J3QK78 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm3139J3QK78 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.07□□□□□ -0.32
Gm3139J3QK78 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm3139J3QK78 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Gm17208-201ENSMUST00000168388 535 ntBASIC13.06□□□□□ -0.32
Gm3139J3QK78 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.06□□□□□ -0.32
Gm3139J3QK78 Gm37042-201ENSMUST00000193816 581 ntBASIC13.06□□□□□ -0.32
Gm3139J3QK78 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.06□□□□□ -0.32
Gm3139J3QK78 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm3139J3QK78 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Gm23931-201ENSMUST00000103842 109 ntBASIC13.05□□□□□ -0.32
Gm3139J3QK78 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Gm25927-201ENSMUST00000175058 117 ntBASIC13.05□□□□□ -0.32
Gm3139J3QK78 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Gm43438-201ENSMUST00000198133 379 ntBASIC13.05□□□□□ -0.32
Gm3139J3QK78 Gm43630-201ENSMUST00000201550 776 ntBASIC13.05□□□□□ -0.32
Gm3139J3QK78 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.05□□□□□ -0.32
Gm3139J3QK78 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Gm10478-201ENSMUST00000084451 396 ntBASIC13.05□□□□□ -0.32
Gm3139J3QK78 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm3139J3QK78 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms