Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Gm15173-201ENSMUST00000122049 433 ntBASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Gm5682-201ENSMUST00000173402 505 ntBASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Psmb5-202ENSMUST00000227257 622 ntBASIC13.46□□□□□ -0.25
Trim55G3X8Y1 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Daam2-202ENSMUST00000224595 1926 ntBASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim55G3X8Y1 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.46□□□□□ -0.26
Trim55G3X8Y1 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim55G3X8Y1 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trim55G3X8Y1 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Trim55G3X8Y1 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC13.46□□□□□ -0.26
Trim55G3X8Y1 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.46□□□□□ -0.26
Trim55G3X8Y1 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim55G3X8Y1 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim55G3X8Y1 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Trim55G3X8Y1 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Gm11779-201ENSMUST00000118541 368 ntBASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Gm6089-201ENSMUST00000197666 938 ntBASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim55G3X8Y1 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms