Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb9E9Q5G2 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Gm37008-201ENSMUST00000195712 319 ntBASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Gm19184-201ENSMUST00000196798 928 ntBASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Gm9899-201ENSMUST00000065519 555 ntBASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Gm10478-201ENSMUST00000084451 396 ntBASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb9E9Q5G2 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb9E9Q5G2 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.39■□□□□ 0.05
Pcdhb9E9Q5G2 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb9E9Q5G2 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.39■□□□□ 0.05
Pcdhb9E9Q5G2 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb9E9Q5G2 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdhb9E9Q5G2 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.39■□□□□ 0.05
Pcdhb9E9Q5G2 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb9E9Q5G2 Gm17420-201ENSMUST00000164753 153 ntBASIC15.39■□□□□ 0.05
Pcdhb9E9Q5G2 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb9E9Q5G2 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.39■□□□□ 0.05
Pcdhb9E9Q5G2 Gm18054-201ENSMUST00000207539 555 ntBASIC15.39■□□□□ 0.05
Pcdhb9E9Q5G2 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb9E9Q5G2 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb9E9Q5G2 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pcdhb9E9Q5G2 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pcdhb9E9Q5G2 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pcdhb9E9Q5G2 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb9E9Q5G2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb9E9Q5G2 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb9E9Q5G2 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb9E9Q5G2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb9E9Q5G2 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb9E9Q5G2 Gm8793-201ENSMUST00000183069 1303 ntBASIC15.39■□□□□ 0.05
Pcdhb9E9Q5G2 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb9E9Q5G2 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb9E9Q5G2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb9E9Q5G2 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms