Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Gm2345-201ENSMUST00000193451 589 ntBASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Gm24891-201ENSMUST00000104391 136 ntBASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Gm23085-201ENSMUST00000157849 293 ntBASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Gm45925-201ENSMUST00000218882 744 ntBASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Gm8018-201ENSMUST00000173536 789 ntBASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Gm23062-201ENSMUST00000102349 110 ntBASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Gm39404-201ENSMUST00000216350 313 ntBASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Col6a3E9PWQ3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Gm13171-201ENSMUST00000117233 391 ntBASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Gm4462-201ENSMUST00000166453 492 ntBASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Gm24078-201ENSMUST00000158184 103 ntBASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Gm17944-201ENSMUST00000186351 643 ntBASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Gm16380-201ENSMUST00000077997 478 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms