Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Dchs1E9PVD3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Dchs1E9PVD3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Dchs1E9PVD3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Dchs1E9PVD3 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Dchs1E9PVD3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Dchs1E9PVD3 Gm15547-201ENSMUST00000122152 333 ntBASIC11.33□□□□□ -0.6
Dchs1E9PVD3 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.33□□□□□ -0.6
Dchs1E9PVD3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.33□□□□□ -0.6
Dchs1E9PVD3 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Dchs1E9PVD3 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Dchs1E9PVD3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.33□□□□□ -0.6
Dchs1E9PVD3 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.33□□□□□ -0.6
Dchs1E9PVD3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Dchs1E9PVD3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.33□□□□□ -0.6
Dchs1E9PVD3 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.33□□□□□ -0.6
Dchs1E9PVD3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.33□□□□□ -0.6
Dchs1E9PVD3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Dchs1E9PVD3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Dchs1E9PVD3 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.33□□□□□ -0.6
Dchs1E9PVD3 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Dchs1E9PVD3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Dchs1E9PVD3 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Dchs1E9PVD3 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
Dchs1E9PVD3 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Dchs1E9PVD3 Gm10076-201ENSMUST00000073238 384 ntBASIC11.33□□□□□ -0.6
Dchs1E9PVD3 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Dchs1E9PVD3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Gm12502-201ENSMUST00000120197 444 ntBASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Gm17812-201ENSMUST00000204935 318 ntBASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Gm8768-201ENSMUST00000220020 826 ntBASIC11.32□□□□□ -0.6
Dchs1E9PVD3 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Gm12015-201ENSMUST00000117065 843 ntBASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Dchs1E9PVD3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Gm42941-201ENSMUST00000200347 1321 ntBASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.31□□□□□ -0.6
Dchs1E9PVD3 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Gm21811-201ENSMUST00000096485 930 ntBASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Gm12058-201ENSMUST00000118614 437 ntBASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Gm14460-201ENSMUST00000121511 639 ntBASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Dchs1E9PVD3 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Dchs1E9PVD3 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms