Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.76□□□□□ -0.53
Shank1D3YZU1 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.76□□□□□ -0.53
Shank1D3YZU1 Gm26956-201ENSMUST00000182176 986 ntBASIC11.76□□□□□ -0.53
Shank1D3YZU1 Gm27023-201ENSMUST00000182372 285 ntBASIC11.76□□□□□ -0.53
Shank1D3YZU1 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.76□□□□□ -0.53
Shank1D3YZU1 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Shank1D3YZU1 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shank1D3YZU1 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Shank1D3YZU1 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.76□□□□□ -0.53
Shank1D3YZU1 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Shank1D3YZU1 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shank1D3YZU1 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.76□□□□□ -0.53
Shank1D3YZU1 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shank1D3YZU1 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shank1D3YZU1 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Gm25214-201ENSMUST00000104573 129 ntBASIC11.75□□□□□ -0.53
Shank1D3YZU1 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.75□□□□□ -0.53
Shank1D3YZU1 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Gm22121-201ENSMUST00000175148 54 ntBASIC11.75□□□□□ -0.53
Shank1D3YZU1 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.75□□□□□ -0.53
Shank1D3YZU1 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Shank1D3YZU1 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 AA914427-201ENSMUST00000193194 1166 ntBASIC11.75□□□□□ -0.53
Shank1D3YZU1 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.75□□□□□ -0.53
Shank1D3YZU1 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shank1D3YZU1 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.74□□□□□ -0.53
Shank1D3YZU1 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Gm9083-201ENSMUST00000120423 819 ntBASIC11.74□□□□□ -0.53
Shank1D3YZU1 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.74□□□□□ -0.53
Shank1D3YZU1 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.74□□□□□ -0.53
Shank1D3YZU1 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Shank1D3YZU1 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms