Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Tmf1B9EKI3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tmf1B9EKI3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tmf1B9EKI3 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tmf1B9EKI3 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tmf1B9EKI3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tmf1B9EKI3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
Tmf1B9EKI3 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tmf1B9EKI3 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Gm22121-201ENSMUST00000175148 54 ntBASIC17.73■□□□□ 0.43
Tmf1B9EKI3 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Gm18222-201ENSMUST00000202416 1387 ntBASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Gm44401-201ENSMUST00000204462 2375 ntBASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tmf1B9EKI3 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Gm5939-201ENSMUST00000119613 2874 ntBASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Snord83b-201ENSMUST00000104546 94 ntBASIC17.72■□□□□ 0.43
Tmf1B9EKI3 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Gm4959-201ENSMUST00000197271 1044 ntBASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Gm32025-201ENSMUST00000217960 307 ntBASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Gm4935-201ENSMUST00000221316 1198 ntBASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 CT030684.3-201ENSMUST00000227308 2445 ntBASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Tmf1B9EKI3 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Tmf1B9EKI3 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Tmf1B9EKI3 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tmf1B9EKI3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tmf1B9EKI3 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Tmf1B9EKI3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Tmf1B9EKI3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tmf1B9EKI3 Gm12329-201ENSMUST00000120829 1007 ntBASIC17.71■□□□□ 0.43
Tmf1B9EKI3 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC17.71■□□□□ 0.43
Tmf1B9EKI3 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC17.71■□□□□ 0.43
Tmf1B9EKI3 Gm7172-201ENSMUST00000218047 1152 ntBASIC17.71■□□□□ 0.43
Tmf1B9EKI3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
Tmf1B9EKI3 Gm38346-201ENSMUST00000192379 2639 ntBASIC17.71■□□□□ 0.43
Tmf1B9EKI3 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tmf1B9EKI3 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tmf1B9EKI3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tmf1B9EKI3 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC17.71■□□□□ 0.43
Tmf1B9EKI3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tmf1B9EKI3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tmf1B9EKI3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tmf1B9EKI3 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tmf1B9EKI3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tmf1B9EKI3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms