Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd6A3KFM7 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Chd6A3KFM7 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Chd6A3KFM7 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Chd6A3KFM7 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Chd6A3KFM7 Gm12020-201ENSMUST00000119030 2042 ntBASIC10.52□□□□□ -0.72
Chd6A3KFM7 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Chd6A3KFM7 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Chd6A3KFM7 Gm12516-201ENSMUST00000120819 385 ntBASIC10.52□□□□□ -0.72
Chd6A3KFM7 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.52□□□□□ -0.72
Chd6A3KFM7 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Chd6A3KFM7 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.52□□□□□ -0.72
Chd6A3KFM7 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Chd6A3KFM7 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Chd6A3KFM7 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd6A3KFM7 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd6A3KFM7 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Chd6A3KFM7 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd6A3KFM7 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd6A3KFM7 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Chd6A3KFM7 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd6A3KFM7 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Chd6A3KFM7 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd6A3KFM7 Gm13736-201ENSMUST00000119272 253 ntBASIC10.52□□□□□ -0.73
Chd6A3KFM7 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd6A3KFM7 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.52□□□□□ -0.73
Chd6A3KFM7 Gm11942-201ENSMUST00000180255 345 ntBASIC10.52□□□□□ -0.73
Chd6A3KFM7 Gm38007-201ENSMUST00000192187 313 ntBASIC10.52□□□□□ -0.73
Chd6A3KFM7 Gm9916-201ENSMUST00000192943 1228 ntBASIC10.52□□□□□ -0.73
Chd6A3KFM7 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC10.52□□□□□ -0.73
Chd6A3KFM7 Gm17831-201ENSMUST00000205579 900 ntBASIC10.52□□□□□ -0.73
Chd6A3KFM7 Gm35713-201ENSMUST00000210516 199 ntBASIC10.52□□□□□ -0.73
Chd6A3KFM7 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.52□□□□□ -0.73
Chd6A3KFM7 Gzmn-202ENSMUST00000225535 989 ntBASIC10.52□□□□□ -0.73
Chd6A3KFM7 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd6A3KFM7 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd6A3KFM7 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Chd6A3KFM7 Gm6198-201ENSMUST00000191337 2929 ntBASIC10.52□□□□□ -0.73
Chd6A3KFM7 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd6A3KFM7 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Chd6A3KFM7 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd6A3KFM7 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Chd6A3KFM7 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC10.52□□□□□ -0.73
Chd6A3KFM7 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd6A3KFM7 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd6A3KFM7 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd6A3KFM7 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Chd6A3KFM7 Zkscan14-203ENSMUST00000198959 2243 ntBASIC10.52□□□□□ -0.73
Chd6A3KFM7 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd6A3KFM7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd6A3KFM7 AC162938.1-201ENSMUST00000213140 2323 ntBASIC10.51□□□□□ -0.73
Chd6A3KFM7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Gm6963-201ENSMUST00000147879 379 ntBASIC10.51□□□□□ -0.73
Chd6A3KFM7 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Gm26875-201ENSMUST00000181006 950 ntBASIC10.51□□□□□ -0.73
Chd6A3KFM7 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Gm17796-201ENSMUST00000189015 1213 ntBASIC10.51□□□□□ -0.73
Chd6A3KFM7 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Gm45598-202ENSMUST00000210719 986 ntBASIC10.51□□□□□ -0.73
Chd6A3KFM7 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.51□□□□□ -0.73
Chd6A3KFM7 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Gm44158-201ENSMUST00000203881 505 ntBASIC10.51□□□□□ -0.73
Chd6A3KFM7 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Chd6A3KFM7 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Gm15770-201ENSMUST00000117498 584 ntBASIC10.5□□□□□ -0.73
Chd6A3KFM7 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.5□□□□□ -0.73
Chd6A3KFM7 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms